RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 FADS1O60427 444 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FRAT2O75474 233 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 SNAPINO95295 136 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 TTC4O95801 387 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 CD8AP01732 235 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MT-ND4P03905 459 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 PCCAP05165 728 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 HOXC4P09017 264 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 TCP1P17987 556 aaKnown RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 CCNE1P24864 410 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 GDF1P27539 372 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 SSTR5P35346 364 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 AQP5P55064 265 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 LIM2P55344 173 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 RAB38P57729 211 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OR10A3P58181 314 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZNF121P58317 390 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 PPP1CBP62140 327 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ARG2P78540 354 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 SEMG2Q02383 582 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 SLC25A11Q02978 314 aaKnown RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 KRR1Q13601 381 aaKnown RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 TAF1AQ15573 450 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 SLC25A35Q3KQZ1 300 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 GPRC6AQ5T6X5 926 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 CST9Q5W186 159 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FAM219BQ5XKK7 198 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZNF57Q68EA5 555 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZNF530Q6P9A1 599 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 C12orf54Q6X4T0 127 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZNF571Q7Z3V5 609 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 CCDC71Q8IV32 467 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 C11orf53Q8IXP5 236 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 PIANPQ8IYJ0 282 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 BLIDQ8IZY5 108 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 LGI3Q8N145 548 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 PNKDQ8N490 385 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 CBR4Q8N4T8 237 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MDS2Q8NDY4 140 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OR51Q1Q8NH59 317 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OR2V1Q8NHB1 315 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZFAND1Q8TCF1 268 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FRAT1Q92837 279 aaPredicted RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 TMEM230Q96A57 120 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 NABP1Q96AH0 204 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FGGYQ96C11 551 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MED8Q96G25 268 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MRAP2Q96G30 205 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 ZNF488Q96MN9 340 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 TMEM56Q96MV1 263 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MCHR1Q99705 422 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OSBPL11Q9BXB4 747 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 COA1Q9GZY4 146 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FAM107BQ9H098 131 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 TLNRD1Q9H1K6 362 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OR51J1Q9H342 316 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 LIME1Q9H400 295 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 FBXO8Q9NRD0 319 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 SLC7A11Q9UPY5 501 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 OR51B2Q9Y5P1 312 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MRPS18BQ9Y676 258 aaKnown RBP2.85□□□□□ -1.95
VPS50-209ENST00000467326 FLT4P35916 1363 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 MTUS2Q5JR59 1369 aa2.85□□□□□ -1.95
VPS50-209ENST00000467326 IGLV3-22A0A075B6J6 115 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 A0A0B4J2A0 478 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 TRBV5-4A0A0C4DH59 114 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 C2orf74A8MZ97 194 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 E9PAM4 449 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 F5H5K5 113 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 F6UB75 175 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 M0R1B8 84 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 PHYHO14832 338 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 RAD1O60671 282 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 OR2B3O76000 313 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 SOX14O95416 240 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 PTTG1O95997 202 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 DHFRP00374 187 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 PTHP01270 115 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 HIST1H1EP10412 219 aaKnown RBP2.84□□□□□ -1.95
VPS50-209ENST00000467326 MYL12AP19105 171 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 RPS12P25398 132 aaKnown RBP2.84□□□□□ -1.95
VPS50-209ENST00000467326 PSMB9P28065 219 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 SPRP35270 261 aaPredicted RBP2.84□□□□□ -1.95
VPS50-209ENST00000467326 GPR6P46095 362 aaPredicted RBP2.84□□□□□ -1.95
VPS50-209ENST00000467326 RPL29P47914 159 aaKnown RBP2.84□□□□□ -1.95
VPS50-209ENST00000467326 SULT1A1P50225 295 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 SULT1A2P50226 295 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 FABP6P51161 128 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 RORCP51449 518 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 BIDP55957 195 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 DLX1P56177 255 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 CLDN12P56749 244 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 ZNF92Q03936 586 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 SMCO1Q147U7 214 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 PON3Q15166 354 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 NDUFA5Q16718 116 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 NSUN5P1Q3KNT7 163 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.95
VPS50-209ENST00000467326 RNF212Q495C1 297 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms