RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MLF1P58340 268 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 UBE2KP61086 200 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 VSNL1P62760 191 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RAP1AP62834 184 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SLC35A1P78382 337 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 KDSRQ06136 332 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 IFFO1Q0D2I5 559 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 MAD2L1BPQ15013 274 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 IRF4Q15306 451 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RBMY1FQ15415 496 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR1Q1Q15612 314 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RSPO1Q2MKA7 263 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ORMDL2Q53FV1 153 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TCEAL5Q5H9L2 206 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 AVPI1Q5T686 147 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 FAHD1Q6P587 224 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CEMP1Q6PRD7 247 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RTL4Q6ZR62 310 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 FAM92BQ6ZTR7 304 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SSX6Q7RTT6 188 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 COMTD1Q86VU5 262 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CALHM3Q86XJ0 350 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SELENOHQ8IZQ5 122 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 UBAC2Q8NBM4 344 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 C19orf18Q8NEA5 215 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR10Z1Q8NGY1 313 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR6K2Q8NGY2 324 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR10G6Q8NH81 332 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ANGPTL6Q8NI99 470 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 DOK4Q8TEW6 326 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TMEM239Q8WW34 195 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RXFP2Q8WXD0 754 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 FRZBQ92765 325 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TCEAL3Q969E4 200 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 EXOSC8Q96B26 276 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CAMK2N2Q96S95 79 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TIMM17AQ99595 171 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TSNAXQ99598 290 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 GABRG3Q99928 467 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 COPS4Q9BT78 406 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CHAC1Q9BUX1 264 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 BEX2Q9BXY8 128 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ARV1Q9H2C2 271 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR52A5Q9H2C5 316 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR51B5Q9H339 312 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 C1orf198Q9H425 327 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TMEM27Q9HBJ8 222 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 NOX3Q9HBY0 568 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 C6orf50Q9HD87 102 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 SLC40A1Q9NP59 571 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 FBXO8Q9NRD0 319 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 RMND1Q9NWS8 449 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 VAPAQ9P0L0 249 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 OR12D3Q9UGF7 316 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 MRM2Q9UI43 246 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 NXT1Q9UKK6 140 aaKnown RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 CFL2Q9Y281 166 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ZNF257Q9Y2Q1 563 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 HYOU1Q9Y4L1 999 aa1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 TET2Q6N021 2002 aaPredicted RBP1.27□□□□□ -2.21
GTF3C3-209ENST00000466862 ITGB4P16144 1822 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 FHOD3Q2V2M9 1422 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 CABIN1Q9Y6J0 2220 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 MN1Q10571 1320 aaPredicted RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 TRAV19A0A0A6YYK7 116 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 TRAV8-4A0A0B4J246 113 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 IGHV5-51A0A0C4DH38 117 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 FAM240AA0A1B0GVK7 77 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 ANKRD20A5PA0PJZ0 165 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 TRPC5OSA6NMA1 111 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 ZNF593O00488 134 aaPredicted RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 B4GALT5O43286 388 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 RP2O75695 350 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 UPK1BO75841 260 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 BRI3O95415 125 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 YEATS4O95619 227 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 FADS2O95864 444 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 PTHP01270 115 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 P01737 135 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 OR5AL1P0C617 328 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 SLC35G6P0C7Q6 338 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 RNASE2P10153 161 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 THRAP10827 490 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 TCN2P20062 427 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 SYT1P21579 422 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 DTYMKP23919 212 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 LOXP28300 417 aaPredicted RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 DNASE1L1P49184 302 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 OR2B6P58173 313 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 RPL23P62829 140 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 CDK5Q00535 292 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 IFITM3Q01628 133 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 RPL18AQ02543 176 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 C2orf54Q08AI8 447 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 C2orf80Q0P641 193 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 DYNC1I2Q13409 638 aaKnown RBP1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 ACTL10Q5JWF8 245 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 FAM27D1Q5T7N8 215 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 RESP18Q5W5W9 173 aa1.26□□□□□ -2.21
GTF3C3-209ENST00000466862 ZNF470Q6ECI4 717 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms