RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 PXDNLA1KZ92 1463 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PHRF1Q9P1Y6 1649 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 IGHV3OR16-12A0A075B7B8 117 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 KCNE1BA0A087WTH5 132 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 A0A0A6YYC8 382 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TRBV7-9A0A0J9YWB2 115 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TRBV11-1A0A0K0K1C0 115 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PNMA8CA0A1B0GUJ8 204 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 C13orf42A0A1B0GVH6 325 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM72A0PK05 275 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 C20orf202A1L168 122 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GJE1A6NN92 205 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 A8MWP6 167 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 DISC1C4P0D8 188 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 C5orf58C9J3I9 102 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 H3BN98 237 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 I3L1I5 382 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 M0R3G1 203 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CXCR6O00574 342 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GOSR2O14653 212 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PDCD5O14737 125 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MSH4O15457 936 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PPIHO43447 177 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MBTPS2O43462 519 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RAD51CO43502 376 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 LANCL1O43813 399 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 KLRC4O43908 158 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MRPS14O60783 128 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SNNO75324 88 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CA11O75493 328 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 LALBAP00709 142 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 IGHV2-5P01817 119 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 APOC3P02656 99 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MMP1P03956 469 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TCRBP04435 133 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CD5P06127 495 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OR8U8P0C7N1 319 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CT45A8P0DMV1 189 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CT45A9P0DMV2 189 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SMIM10L1P0DMW3 83 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ANXA3P12429 323 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PGAM2P15259 253 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 B4GALT1P15291 398 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CSNK2A2P19784 350 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GZMHP20718 246 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ACP1P24666 158 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 STOMP27105 288 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CD82P27701 267 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PSMB5P28074 263 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 S100A2P29034 98 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GGT2P36268 569 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PMELP40967 661 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 AKR1C3P42330 323 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RBM34P42696 430 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RGRP47804 291 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GCLMP48507 274 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NOVA1P51513 510 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MFAP2P55001 183 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SNU13P55769 128 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ATP5J2P56134 94 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CLDN18P56856 261 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SNRPD2P62316 118 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RPL23AP62750 156 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PPP3R1P63098 170 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PRKCDQ05655 676 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 FABP9Q0Z7S8 132 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 EXOSC2Q13868 293 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GK3PQ14409 553 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GPNMBQ14956 572 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NRF1Q16656 503 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ISXQ2M1V0 245 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 IFI44LQ53G44 452 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CT45A2Q5DJT8 189 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PIGGQ5H8A4 983 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 FAM74A1Q5RGS3 127 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NCMAPQ5T1S8 102 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NXNL2Q5VZ03 156 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF562Q6V9R5 426 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 WDR88Q6ZMY6 472 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 Q6ZVH6 145 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 APTXQ7Z2E3 356 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TMED4Q7Z7H5 227 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 FUNDC1Q8IVP5 155 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 BAP18Q8IXM2 172 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 BOD1L2Q8IYS8 172 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 BATF2Q8N1L9 274 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 DHRSXQ8N5I4 330 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ACBD7Q8N6N7 88 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 LRRC52Q8N7C0 313 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 YIPF7Q8N8F6 280 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 GATSQ8NAP1 163 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RELL2Q8NC24 303 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OR4F15Q8NGB8 312 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OR6K3Q8NGY3 331 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OR8U1Q8NH10 309 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 WDR36Q8NI36 951 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 COQ8AQ8NI60 647 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RNF133Q8WVZ7 376 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OSTF1Q92882 214 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms