RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 DNAL1Q4LDG9 190 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 LCN1P1Q5VSP4 162 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 KCTD18Q6PI47 426 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-206ENST00000466591 BRICD5Q6PL45 260 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 VMO1Q7Z5L0 202 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 CPOQ8IVL8 374 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 ADGRG5Q8IZF4 528 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 GALNT4Q8N4A0 578 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM86BQ8N661 226 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 FAM216BQ8N7L0 139 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 OR5T2Q8NGG2 359 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 CANT1Q8WVQ1 401 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 RPL3LQ92901 407 aaKnown RBP14.5□□□□□ -0.09
COL7A1-206ENST00000466591 C12orf43Q96C57 262 aaKnown RBP14.5□□□□□ -0.09
COL7A1-206ENST00000466591 AMELYQ99218 206 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 PKP2Q99959 881 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 PRRG3Q9BZD7 231 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 CHIAQ9BZP6 476 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 C1orf21Q9H246 121 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 DPAGT1Q9H3H5 408 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 SNTG1Q9NSN8 517 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 TAS2R1Q9NYW7 299 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 KAAG1Q9UBP8 84 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF391Q9UJN7 358 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 KPTNQ9Y664 436 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 POMT1Q9Y6A1 747 aa14.5□□□□□ -0.09
COL7A1-206ENST00000466591 GPR37O15354 613 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 NDUFB7P17568 137 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 GABRA2P47869 451 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 PSMA6P60900 246 aaKnown RBP14.49□□□□□ -0.09
COL7A1-206ENST00000466591 CBX1P83916 185 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 GUCA2AQ02747 115 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 BLMHQ13867 455 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 SNAPC1Q16533 368 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 SLC35D3Q5M8T2 416 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 WDR86Q86TI4 376 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 KIR3DL3Q8N743 410 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 LRTOMTQ8WZ04 291 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 MROQ9BYG7 248 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 SIRPDQ9H106 197 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 SLITRK2Q9H156 845 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 HAO2Q9NYQ3 351 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 GTF2A1LQ9UNN4 478 aa14.49□□□□□ -0.09
COL7A1-206ENST00000466591 TENM1Q9UKZ4 2725 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 ACOT8O14734 319 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 MRPL3P09001 348 aaKnown RBP14.48□□□□□ -0.09
COL7A1-206ENST00000466591 MMP9P14780 707 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 GLRA1P23415 457 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 MAP2K3P46734 347 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 CAPZA1P52907 286 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 APOFQ13790 326 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 TREML4Q6UXN2 200 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 DYRK2Q92630 601 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 ITPKCQ96DU7 683 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 MED30Q96HR3 178 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 SIRT7Q9NRC8 400 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 TVP23BQ9NYZ1 205 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 IKZF2Q9UKS7 526 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 LRP12Q9Y561 859 aa14.48□□□□□ -0.09
COL7A1-206ENST00000466591 A0A0U1RQK1 487 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF816-ZNF321PA0A0X1KG74 233 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM269A0A1B0GVZ9 245 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 AKR7A2O43488 359 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 FBP1P09467 338 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 PRKACGP22612 351 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 GPM6AP51674 278 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM236Q5W0B7 351 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 OLFML2AQ68BL7 652 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 PRSS45Q7RTY3 260 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 OR8B12Q8NGG6 310 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 OR10Z1Q8NGY1 313 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 OR5P3Q8WZ94 311 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 SEH1LQ96EE3 360 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 PPP1R3EQ9H7J1 279 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 PAPOLBQ9NRJ5 636 aaKnown RBP14.47□□□□□ -0.09
COL7A1-206ENST00000466591 H2AFY2Q9P0M6 372 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF319Q9P2F9 582 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 DNAJB9Q9UBS3 223 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 SLC25A10Q9UBX3 287 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM14AQ9Y6G1 99 aa14.47□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1B0GW55 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1W2PRD5 423 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1W2PRF3 423 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 A0A1W2PRM7 423 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 PSMD9O00233 223 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 CST4P01036 141 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L2P0CJ85 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L3P0CJ86 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L4P0CJ87 422 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L5P0CJ88 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L6P0CJ89 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L7P0CJ90 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 T-ENOLP0DO92 83 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF829Q3KNS6 432 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-206ENST00000466591 CEP78Q5JTW2 689 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 PLCXD3Q63HM9 321 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4L9Q6RFH8 374 aaPredicted RBP14.46□□□□□ -0.09
COL7A1-206ENST00000466591 GDPGP1Q6ZNW5 385 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 TMEM179BQ7Z7N9 219 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 C11orf53Q8IXP5 236 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms