RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SBK2P0C263 348 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 CA6P23280 308 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 OTX1P32242 354 aaPredicted RBP8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 RANBP1P43487 201 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 TMEM33P57088 247 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 ST3GAL4Q11206 333 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 POU4F2Q12837 409 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 IRF3Q14653 427 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 SPCS2Q15005 226 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 OR8G1Q15617 311 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC16A9Q7RTY1 509 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 PEG10Q86TG7 708 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 MOGAT3Q86VF5 341 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 RFLNBQ8N5W9 214 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 LINC01356Q8N9X3 169 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 OR51G2Q8NGK0 314 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 OR13G1Q8NGZ3 307 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 RAB1CQ92928 201 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 RFKQ969G6 155 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 REEP6Q96HR9 211 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 MEGF10Q96KG7 1140 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 CNN2Q99439 309 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 TEAD3Q99594 435 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC30A2Q9BRI3 323 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 ADAT1Q9BUB4 502 aaKnown RBP8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 MND1Q9BWT6 205 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 DCSTAMPQ9H295 470 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 TMEM106BQ9NUM4 274 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 UFSP2Q9NUQ7 469 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 TMEM100Q9NV29 134 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 IL19Q9UHD0 177 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 GTF2A1LQ9UNN4 478 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 PPP1R3CQ9UQK1 317 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 LRP12Q9Y561 859 aa8.23□□□□□ -1.09
RTFDC1-205ENST00000466260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.095e-6■■■■■ 29.1
RTFDC1-205ENST00000466260 HIVEP2P31629 2446 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 TLN2Q9Y4G6 2542 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 A0A1B0GVG6 124 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 MAGEB4O15481 346 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 CRLF1O75462 422 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 APOA1P02647 267 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 ADH4P08319 380 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 GABRB1P18505 474 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 MYL12AP19105 171 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 PSMA1P25786 263 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 OPRL1P41146 370 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 SRP9P49458 86 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 MRPS11P82912 194 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 HOXA4Q00056 320 aaPredicted RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 CR1LQ2VPA4 569 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 CHRFAM7AQ494W8 412 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 SPANXN2Q5MJ10 180 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 FAM201AQ5SY85 155 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 NXNL2Q5VZ03 156 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 PLEKHG7Q6ZR37 379 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 MEPCEQ7L2J0 689 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 COMMD2Q86X83 199 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 SLC35F2Q8IXU6 374 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 CENPSQ8N2Z9 138 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 BOLLQ8N9W6 283 aaKnown RBP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 C19orf18Q8NEA5 215 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 APH1BQ8WW43 257 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 GGHQ92820 318 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 TMEM80Q96HE8 168 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 SHARPINQ9H0F6 387 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 OR10A2Q9H208 303 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF665Q9H7R5 613 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 ZNF319Q9P2F9 582 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 DAPK2Q9UIK4 370 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 NPTNQ9Y639 398 aa8.22□□□□□ -1.09
RTFDC1-205ENST00000466260 A0A075B6Q4 140 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 SLC22A31A6NKX4 558 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 A6NLC8 198 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 PRR32B1ATL7 298 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 MYL12BO14950 172 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 PTTG1O95997 202 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 APOC1P02654 83 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 GRPP07492 148 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 IRF2P14316 349 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 ALOX5APP20292 161 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 TGFBR2P37173 567 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 ETV6P41212 452 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 MAP2K4P45985 399 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 BCAP31P51572 246 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 MAB21L1Q13394 359 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 OXA1LQ15070 435 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 ARMCX4Q5H9R4 360 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 AADACL4Q5VUY2 407 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 GLCCI1Q86VQ1 547 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 GID4Q8IVV7 300 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 OR8B12Q8NGG6 310 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 OR8S1Q8NH09 359 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 UBE2FQ969M7 185 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 SGK3Q96BR1 496 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 RAB39BQ96DA2 213 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms