RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 LMO4P61968 165 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 MRPL28Q13084 256 aaKnown RBP17.1■□□□□ 0.33
SKA3-205ENST00000465471 CCDC54Q8NEL0 328 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 OR8S1Q8NH09 359 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 TMEM80Q96HE8 168 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 TLNRD1Q9H1K6 362 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 ENPP5Q9UJA9 477 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 PIGLQ9Y2B2 252 aa17.1■□□□□ 0.33
SKA3-205ENST00000465471 CAB39Q9Y376 341 aaPredicted RBP17.1■□□□□ 0.33
SKA3-205ENST00000465471 EXOSC1Q9Y3B2 195 aaKnown RBP17.1■□□□□ 0.33
SKA3-205ENST00000465471 ANXA2P2A6NMY6 339 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 OR4C45A6NMZ5 311 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 CYB5R3P00387 301 aaPredicted RBP17.09■□□□□ 0.33
SKA3-205ENST00000465471 ISG15P05161 165 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 BTG1P62324 171 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 ZMYND11Q15326 602 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 ODF4Q2M2E3 257 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 FAM76BQ5HYJ3 339 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 C6orf141Q5SZD1 244 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 PEG10Q86TG7 708 aaKnown RBP17.09■□□□□ 0.33
SKA3-205ENST00000465471 C11orf53Q8IXP5 236 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 ZDHHC23Q8IYP9 409 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 OR1M1Q8NGA1 313 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 HAVCR2Q8TDQ0 301 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 PIGCQ92535 297 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 MICU1Q9BPX6 476 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 FN3KRPQ9HA64 309 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 UFSP2Q9NUQ7 469 aa17.09■□□□□ 0.33
SKA3-205ENST00000465471 ANK3Q12955 4377 aaKnown RBP17.08■□□□□ 0.33
SKA3-205ENST00000465471 A0A1B0GVI7 797 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 LRRC30A6NM36 301 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 E9PI62 339 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 SYT7O43581 403 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 THBS2P35442 1172 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 TGM4P49221 684 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 GZMKP49863 264 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 ST3GAL4Q11206 333 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 ZNF154Q13106 437 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 ALKBH1Q13686 389 aaKnown RBP17.08■□□□□ 0.32
SKA3-205ENST00000465471 TMEM155Q4W5P6 130 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 LRRC28Q86X40 367 aaPredicted RBP17.08■□□□□ 0.32
SKA3-205ENST00000465471 ZNF485Q8NCK3 441 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 BPIFB6Q8NFQ5 453 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 RPS4Y2Q8TD47 263 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 RTL8AQ9BWD3 113 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 NARFLQ9H6Q4 476 aa17.08■□□□□ 0.32
SKA3-205ENST00000465471 TMEM210A6NLX4 147 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 SLC1A7O00341 560 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 IGHV2-5P01817 119 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 MYL12AP19105 171 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 CSNK2BP67870 215 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 CLVS2Q5SYC1 327 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 OR2G6Q5TZ20 316 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 TMEM244Q5VVB8 128 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 RDH10Q8IZV5 341 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 C1orf87Q8N0U7 546 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 OR11L1Q8NGX0 322 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 OR52N1Q8NH53 320 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 MSI2Q96DH6 328 aaKnown RBP17.07■□□□□ 0.32
SKA3-205ENST00000465471 CLEC2DQ9UHP7 191 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 RAB26Q9ULW5 256 aa17.07■□□□□ 0.32
SKA3-205ENST00000465471 MALRD1Q5VYJ5 2156 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 HIVEP2P31629 2446 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 RRP9O43818 475 aaKnown RBP17.06■□□□□ 0.32
SKA3-205ENST00000465471 LMX1BO60663 402 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 GRPP07492 148 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 ZNF12P17014 697 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 CFHR2P36980 270 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 MDH2P40926 338 aaKnown RBP17.06■□□□□ 0.32
SKA3-205ENST00000465471 GBX2P52951 348 aaPredicted RBP17.06■□□□□ 0.32
SKA3-205ENST00000465471 CDH15P55291 814 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 CYB5R2Q6BCY4 276 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 TMPRSS11AQ6ZMR5 421 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 ZNF826PQ6ZT77 177 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 AHSA2Q719I0 299 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 KLHL36Q8N4N3 616 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 C10orf35Q96D05 121 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 ZNF665Q9H7R5 613 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 C1orf123Q9NWV4 160 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 RNF7Q9UBF6 113 aa17.06■□□□□ 0.32
SKA3-205ENST00000465471 FN1P02751 2386 aaKnown RBP17.05■□□□□ 0.32
SKA3-205ENST00000465471 NRASP01111 189 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 LHBP01229 141 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 ZNF16P17020 682 aaPredicted RBP17.05■□□□□ 0.32
SKA3-205ENST00000465471 C21orf33P30042 268 aaPredicted RBP17.05■□□□□ 0.32
SKA3-205ENST00000465471 CCDC58Q4VC31 144 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 CEP78Q5JTW2 689 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 XAF1Q6GPH4 301 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 WDR82Q6UXN9 313 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 MUC20Q8N307 709 aaPredicted RBP17.05■□□□□ 0.32
SKA3-205ENST00000465471 GCSAMQ8N6F7 178 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 OR5A2Q8NGI9 324 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 RNF170Q96K19 258 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 GAL3ST1Q99999 423 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 CHST5Q9GZS9 411 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 TMEM165Q9HC07 324 aa17.05■□□□□ 0.32
SKA3-205ENST00000465471 ISPDA4D126 451 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 OR5B21A6NL26 309 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 A6NLC8 198 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms