RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PKP2Q99959 881 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 TTTY10Q9BZA0 68 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 KRT84Q9NSB2 600 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 FAM206AQ9NX38 181 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 DUX4Q9UBX2 424 aa21.43■■□□□ 1.02
U2AF1-206ENST00000464750 TMEM210A6NLX4 147 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 PRR32B1ATL7 298 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 SRRM5B3KS81 715 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 CLDN34H7C241 214 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 M0R129 80 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 P2RY10O00398 339 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 TOX4O94842 621 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 MMP9P14780 707 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 RUSC1-AS1Q66K80 236 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 DEGS2Q6QHC5 323 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 BTN2A1Q7KYR7 527 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 ZDHHC23Q8IYP9 409 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 HPSE2Q8WWQ2 592 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 OR5P3Q8WZ94 311 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 RPL3LQ92901 407 aaKnown RBP21.42■■□□□ 1.02
U2AF1-206ENST00000464750 SLC25A28Q96A46 364 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 SEH1LQ96EE3 360 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 TBX15Q96SF7 602 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 CCL13Q99616 98 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 MROQ9BYG7 248 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 FGF23Q9GZV9 251 aaPredicted RBP21.42■■□□□ 1.02
U2AF1-206ENST00000464750 COPS3Q9UNS2 423 aa21.42■■□□□ 1.02
U2AF1-206ENST00000464750 RASSF2P50749 326 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 FOXL1Q12952 345 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 DEFB112Q30KQ8 113 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 METTL11BQ5VVY1 283 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 KCTD8Q6ZWB6 473 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 FGFRL1Q8N441 504 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 FAM216BQ8N7L0 139 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 WDFY2Q96P53 400 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 OR8B4Q96RC9 309 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 CNN2Q99439 309 aaKnown RBP21.41■■□□□ 1.02
U2AF1-206ENST00000464750 TMEM14AQ9Y6G1 99 aa21.41■■□□□ 1.02
U2AF1-206ENST00000464750 TMEM269A0A1B0GVZ9 245 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 G3V2T6 193 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 ECDO95905 644 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-206ENST00000464750 FASP25445 335 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 BPIFB3P59826 476 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 GMFBP60983 142 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 ROM1Q03395 351 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 C1orf146Q5VVC0 180 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 SLX4IPQ5VYV7 408 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 SLC36A1Q7Z2H8 476 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 BCDIN3DQ7Z5W3 292 aaKnown RBP21.4■■□□□ 1.02
U2AF1-206ENST00000464750 COMMD2Q86X83 199 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 ZNF679Q8IYX0 411 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 OR10Z1Q8NGY1 313 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 ASB17Q8WXJ9 295 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 C12orf43Q96C57 262 aaKnown RBP21.4■■□□□ 1.02
U2AF1-206ENST00000464750 RNF170Q96K19 258 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 GABARAPL1Q9H0R8 117 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 SIRPDQ9H106 197 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 IKZF2Q9UKS7 526 aa21.4■■□□□ 1.02
U2AF1-206ENST00000464750 A0A0U1RQV5 110 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 ZNF816-ZNF321PA0A0X1KG74 233 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 ACOD1A6NK06 481 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 EPHA2P29317 976 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 MAP2K3P46734 347 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 C11orf91Q3C1V1 193 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 ZNF829Q3KNS6 432 aaPredicted RBP21.39■■□□□ 1.01
U2AF1-206ENST00000464750 STUMQ69YW2 141 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 TCEANCQ8N8B7 351 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 SCCPDHQ8NBX0 429 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 ZDHHC16Q969W1 377 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 PBOV1Q9GZY1 135 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 DNAJB11Q9UBS4 358 aa21.39■■□□□ 1.01
U2AF1-206ENST00000464750 RPUSD1Q9UJJ7 312 aaKnown RBP21.39■■□□□ 1.01
U2AF1-206ENST00000464750 ZAR1LA6NP61 321 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 ZNF254O75437 659 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 ATP5HO75947 161 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 DCTDP32321 178 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 RIDAP52758 137 aaKnown RBP21.38■■□□□ 1.01
U2AF1-206ENST00000464750 ARF6P62330 175 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 C12orf73Q69YU5 71 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 KDM4DQ6B0I6 523 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 MEPCEQ7L2J0 689 aaKnown RBP21.38■■□□□ 1.01
U2AF1-206ENST00000464750 ZDHHC13Q8IUH4 622 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 TMEM163Q8TC26 289 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 FAM71F1Q96KD3 344 aaPredicted RBP21.38■■□□□ 1.01
U2AF1-206ENST00000464750 HIST1H2AAQ96QV6 131 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 WDR13Q9H1Z4 485 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 SNTG1Q9NSN8 517 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 HAO2Q9NYQ3 351 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 AP4S1Q9Y587 144 aa21.38■■□□□ 1.01
U2AF1-206ENST00000464750 CENPVL3A0A0U1RRI6 287 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 HOXA3O43365 443 aaPredicted RBP21.37■■□□□ 1.01
U2AF1-206ENST00000464750 GPM6AP51674 278 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 MFGE8Q08431 387 aaPredicted RBP21.37■■□□□ 1.01
U2AF1-206ENST00000464750 IKZF1Q13422 519 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 FAM76BQ5HYJ3 339 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 AADACL4Q5VUY2 407 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 NXNL2Q5VZ03 156 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 AMIGO2Q86SJ2 522 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 OR5T2Q8NGG2 359 aa21.37■■□□□ 1.01
U2AF1-206ENST00000464750 RAB3IPQ96QF0 476 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms