RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 Q6ZSR6 202 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FAM219AQ8IW50 185 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SFTPA2Q8IWL1 248 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PNLDC1Q8NA58 520 aaKnown RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 LFNGQ8NES3 379 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 CSNK2A3Q8NEV1 391 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SSC4DQ8WTU2 575 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 SLC25A43Q8WUT9 341 aaPredicted RBP6.45□□□□□ -1.38
USP48-206ENST00000464577 C11orf40Q8WZ69 217 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 FBXO17Q96EF6 278 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 ARHGAP5-AS1Q96IT6 56 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 IP6K3Q96PC2 410 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 PBDC1Q9BVG4 233 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 OR8D2Q9GZM6 311 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 OR10A2Q9H208 303 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 OPA3Q9H6K4 179 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 TREM2Q9NZC2 230 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 EHFQ9NZC4 300 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 HS3ST3A1Q9Y663 406 aa6.45□□□□□ -1.38
USP48-206ENST00000464577 IGKV3D-11A0A0A0MRZ8 115 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 IGKV1D-43A0A0B4J1Z2 117 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 E5RGE8 158 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 IFNA21P01568 189 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 HOXA5P20719 270 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 OR3A4PP47883 348 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 P2RY1P47900 373 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 PLCXD2Q0VAA5 305 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 ZNF239Q16600 458 aaKnown RBP6.44□□□□□ -1.38
USP48-206ENST00000464577 OR2B11Q5JQS5 317 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 H1FNTQ75WM6 255 aaPredicted RBP6.44□□□□□ -1.38
USP48-206ENST00000464577 OR10S1Q8NGN2 331 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 MFSD8Q8NHS3 518 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 ISOC2Q96AB3 205 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 GAL3ST4Q96RP7 486 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 REPIN1Q9BWE0 567 aaKnown RBP6.44□□□□□ -1.38
USP48-206ENST00000464577 OR11A1Q9GZK7 315 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 TOLLIPQ9H0E2 274 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 SLC35B3Q9H1N7 401 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 TCEAL2Q9H3H9 227 aaPredicted RBP6.44□□□□□ -1.38
USP48-206ENST00000464577 C19orf12Q9NSK7 152 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 NSG2Q9Y328 171 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 HDGFL3Q9Y3E1 203 aa6.44□□□□□ -1.38
USP48-206ENST00000464577 TMEM184BQ9Y519 407 aaPredicted RBP6.44□□□□□ -1.38
USP48-206ENST00000464577 CRYM-AS1A6NIL9 109 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 C17orf51A8MQB3 221 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SERPINE3A8MV23 424 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ZNF878C9JN71 531 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 GPR137BO60478 399 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CRTAPO75718 401 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 KLF8O95600 359 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 CELA2BP08218 269 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 CHATP28329 748 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ALDH3B1P43353 468 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CAMLGP49069 296 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SSTP61278 116 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SLC35A1P78382 337 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 HSF1Q00613 529 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CLINT1Q14677 625 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TGIF1Q15583 401 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CHRFAM7AQ494W8 412 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 DNLZQ5SXM8 178 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 GPR157Q5UAW9 335 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 HLA-DQA1Q5Y7H0 255 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 GGNBP1Q5YKI7 109 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 HEPN1Q6WQI6 88 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SGPP2Q8IWX5 399 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 C9orf40Q8IXQ3 194 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 LRRC18Q8N456 261 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 METTL27Q8N6F8 245 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 ZNF565Q8N9K5 539 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 OR13H1Q8NG92 308 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 OR51E1Q8TCB6 317 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TMEM234Q8WY98 164 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 C5orf34Q96MH7 638 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TGM7Q96PF1 710 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 S100A13Q99584 98 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 GGACTQ9BVM4 153 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 RAB33BQ9H082 229 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 BANF2Q9H503 90 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CHST11Q9NPF2 352 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 KCNJ16Q9NPI9 418 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 DECR2Q9NUI1 292 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PNV4 684 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 C10orf142B7Z368 130 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 MASP2O00187 686 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SDCBPO00560 298 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 NME2P1O60361 137 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 HPNP05981 417 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 HCKP08631 526 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 IL11P20809 199 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 CDX1P47902 265 aaPredicted RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 RPS23P62266 143 aaKnown RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 ZNF616Q08AN1 781 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ADAM5Q6NVV9 412 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms