RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RHCEP18577 417 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 SLC35A2P78381 396 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 IL5RAQ01344 420 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 KLF10Q13118 480 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 KRT72Q14CN4 511 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 SEC23BQ15437 767 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 SNCBQ16143 134 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 PROKR2Q8NFJ6 384 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 OR52J3Q8NH60 311 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 SLAMF6Q96DU3 332 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 PAPOLGQ9BWT3 736 aaKnown RBP11.72□□□□□ -0.53
SMC1A-204ENST00000463684 CDCA4Q9BXL8 241 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 CMTM6Q9NX76 183 aa11.72□□□□□ -0.53
SMC1A-204ENST00000463684 A0A1W2PPH5 198 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 OR2AT4A6NND4 320 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 E9PQ18 207 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 AKR7A2O43488 359 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 PF4P02776 101 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 TFF1P04155 84 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 ANXA2P07355 339 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 CFL1P23528 166 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 PYCR1P32322 319 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 SLC15A1P46059 708 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 SPIBQ01892 262 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 LIPEQ05469 1076 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 CNN3Q15417 329 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 SLC35F1Q5T1Q4 408 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 MKXQ8IYA7 352 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 FTMTQ8N4E7 242 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 CSNK2A3Q8NEV1 391 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 OR2T4Q8NH00 348 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 WIPF2Q8TF74 440 aaPredicted RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 RPL3LQ92901 407 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 FAM162AQ96A26 154 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 SGK3Q96BR1 496 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 WNT10AQ9GZT5 417 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 ELL3Q9HB65 397 aaPredicted RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 ABCB10Q9NRK6 738 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 NDUFAF4Q9P032 175 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 GMPR2Q9P2T1 348 aaKnown RBP11.71□□□□□ -0.53
SMC1A-204ENST00000463684 NLKQ9UBE8 527 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 PITPNC1Q9UKF7 332 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 RHBDD3Q9Y3P4 386 aa11.71□□□□□ -0.53
SMC1A-204ENST00000463684 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 A0A1W2PR64 198 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 WI2-2373I1.2A0A1W2PRP0 233 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 MEGF11A6BM72 1044 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF878C9JN71 531 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 EDF1O60869 148 aaKnown RBP11.7□□□□□ -0.54
SMC1A-204ENST00000463684 ALDOBP05062 364 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 SPARCP09486 303 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 HSD11B1P28845 292 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 CX3CR1P49238 355 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 GSK3AP49840 483 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 RAB13P51153 203 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 CAPZA1P52907 286 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 GRB2P62993 217 aaKnown RBP11.7□□□□□ -0.54
SMC1A-204ENST00000463684 MXRA7P84157 204 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 KCTD8Q6ZWB6 473 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 SLC15A3Q8IY34 581 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 ZNRF1Q8ND25 227 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 TMEM185AQ8NFB2 350 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 ATP6V1G3Q96LB4 118 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 TCF19Q9Y242 345 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
SMC1A-204ENST00000463684 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF593O00488 134 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-204ENST00000463684 APOC1P02654 83 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 GLRA1P23415 457 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-204ENST00000463684 SMIM11AP58511 58 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 GFOD2Q3B7J2 385 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 PLA1AQ53H76 456 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 FAM86B1Q8N7N1 296 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 OR5K1Q8NHB7 308 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 RPS4Y2Q8TD47 263 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 RNF170Q96K19 258 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 ABCB9Q9NP78 766 aa11.69□□□□□ -0.54
SMC1A-204ENST00000463684 A6NDX4 124 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 DIRAS1O95057 198 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 COX7A1P24310 79 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 FMO3P31513 532 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 IFNGR2P38484 337 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 ENTPD1P49961 510 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 CD83Q01151 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms