RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 POU2F3Q9UKI9 436 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 MPC1Q9Y5U8 109 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 DCHS2Q6V1P9 2916 aa12.24□□□□□ -0.45
COL6A1-202ENST00000463060 A0A0G2JK05 382 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF850A8MQ14 1090 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 VSTM5A8MXK1 200 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 MLNRO43193 412 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 IL1AP01583 271 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 CLEC2LP0C7M8 214 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 DANCRP0C864 163 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 CA6P23280 308 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 GNALP38405 381 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 PRDX4Q13162 271 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 RNF144BQ7Z419 303 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 BHLHE23Q8NDY6 225 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 NDNFQ8TB73 568 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 HPSE2Q8WWQ2 592 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 PLK3Q9H4B4 646 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 TCF7L1Q9HCS4 588 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 TMEM138Q9NPI0 162 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 GPR173Q9NS66 373 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 GPR160Q9UJ42 338 aa12.23□□□□□ -0.45
COL6A1-202ENST00000463060 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-202ENST00000463060 MEGF11A6BM72 1044 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 ANKRD30BLA7E2S9 258 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 HS3ST1O14792 307 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 SULT1B1O43704 296 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 TIMM8AO60220 97 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-202ENST00000463060 CDRT1O95170 752 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 ADH4P08319 380 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 COX6B1P14854 86 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 RAB3AP20336 220 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 SELENOVP59797 346 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 MOGQ16653 247 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 CEACAM21Q3KPI0 293 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 DMRTC1Q5HYR2 192 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 FAM166AQ6J272 317 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 MOB3CQ70IA8 216 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 CDH26Q8IXH8 852 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 FTMTQ8N4E7 242 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 DNAAF1Q8NEP3 725 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 OR5A2Q8NGI9 324 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 DYNC2LI1Q8TCX1 351 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 OR5P3Q8WZ94 311 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 GTF3AQ92664 365 aaKnown RBP12.22□□□□□ -0.45
COL6A1-202ENST00000463060 TECTBQ96PL2 329 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 PAPOLGQ9BWT3 736 aaKnown RBP12.22□□□□□ -0.45
COL6A1-202ENST00000463060 SLC22A4Q9H015 551 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 DCSTAMPQ9H295 470 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 CKLFQ9UBR5 152 aa12.22□□□□□ -0.45
COL6A1-202ENST00000463060 CGGBP1Q9UFW8 167 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-202ENST00000463060 PQLC2LA1A4F0 135 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 ZSCAN5BA6NJL1 495 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 B9A039 149 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 H0YL77 283 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 CD8AP01732 235 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 MYL9P24844 172 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 AZGP1P25311 298 aaKnown RBP12.21□□□□□ -0.45
COL6A1-202ENST00000463060 COL8A1P27658 744 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 CFPP27918 469 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 BDKRB2P30411 391 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 SERPINB10P48595 397 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 TLE4Q04727 773 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 FAM76BQ5HYJ3 339 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 C1orf100Q5SVJ3 147 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 C11orf71Q6IPW1 123 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 DTX2Q86UW9 622 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 ZNF611Q8N823 705 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 OR52N4Q8NGI2 321 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 OR13G1Q8NGZ3 307 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 SPSB1Q96BD6 273 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 BARHL1Q9BZE3 327 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 MSL2Q9HCI7 577 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 ABCB9Q9NP78 766 aa12.21□□□□□ -0.45
COL6A1-202ENST00000463060 AK6Q9Y3D8 172 aaKnown RBP12.21□□□□□ -0.45
COL6A1-202ENST00000463060 LRBAP50851 2863 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 LOC100289279A0A1B0GTE1 492 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 A0A1W2PPW3 197 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 CCDC160A6NGH7 325 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
COL6A1-202ENST00000463060 PTBP3O95758 552 aaKnown RBP12.2□□□□□ -0.46
COL6A1-202ENST00000463060 MAS1P04201 325 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 RAB3BP20337 219 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 PRKACBP22694 351 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 FUT6P51993 359 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 OR10A3P58181 314 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 PPP3R1P63098 170 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
COL6A1-202ENST00000463060 PLCXD3Q63HM9 321 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 ZDHHC23Q8IYP9 409 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 MUC15Q8N387 334 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 IGFBPL1Q8WX77 278 aa12.2□□□□□ -0.46
COL6A1-202ENST00000463060 FBXW5Q969U6 566 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms