RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NMNAT2Q9BZQ4 307 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 FBXO7Q9Y3I1 522 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 TCF20Q9UGU0 1960 aaKnown RBP10.4□□□□□ -0.74
RBM39-223ENST00000463004 TGFBR3LH3BV60 316 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 ARPC5O15511 151 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 MT-CO2P00403 227 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 ISG15P05161 165 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 MEX3BQ6ZN04 569 aaKnown RBP10.4□□□□□ -0.74
RBM39-223ENST00000463004 MFSD4AQ8N468 514 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 PPIL3Q9H2H8 161 aaKnown RBP10.4□□□□□ -0.74
RBM39-223ENST00000463004 PLEKHB1Q9UF11 243 aaPredicted RBP10.4□□□□□ -0.74
RBM39-223ENST00000463004 NEUROG3Q9Y4Z2 214 aa10.4□□□□□ -0.74
RBM39-223ENST00000463004 ZSCAN5BA6NJL1 495 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 LY86O95711 162 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 CD59P13987 128 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 KCNJ3P48549 501 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 BHLHA15Q7RTS1 189 aaPredicted RBP10.4□□□□□ -0.75
RBM39-223ENST00000463004 PRSS45Q7RTY3 260 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 LINC00596Q86U02 117 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 BHLHE23Q8NDY6 225 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 PIGMQ9H3S5 423 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 OR5V1Q9UGF6 321 aa10.4□□□□□ -0.75
RBM39-223ENST00000463004 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.75
RBM39-223ENST00000463004 SLC33A1O00400 549 aaPredicted RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 CYTIPO60759 359 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 HIST1H1DP16402 221 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 PPP1CBP62140 327 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 C10orf128Q5T292 105 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 C1QTNF12Q5T7M4 302 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 OR5AS1Q8N127 324 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 RND1Q92730 232 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 ESRP2Q9H6T0 727 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 NUP50Q9UKX7 468 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 M0QYG6 137 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 GFRA3O60609 400 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 CA11O75493 328 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 PMP2P02689 132 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 TMEM200AQ86VY9 491 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 GPX8Q8TED1 209 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 SGK3Q96BR1 496 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 NXF2Q9GZY0 626 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 MS4A18H0YCH9 400 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 SMAD9O15198 467 aaKnown RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 CAV2P51636 162 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 LUMP51884 338 aaPredicted RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 ZNF92Q03936 586 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 PRDX4Q13162 271 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 ETFDHQ16134 617 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 MS4A18Q3C1V0 323 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 C1orf185Q5T7R7 199 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 NAA40Q86UY6 237 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 MED30Q96HR3 178 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 ZNF436Q9C0F3 470 aaPredicted RBP10.39□□□□□ -0.75
RBM39-223ENST00000463004 CXXC4Q9H2H0 198 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 SLC23A1Q9UHI7 598 aa10.39□□□□□ -0.75
RBM39-223ENST00000463004 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 PPP3CBP16298 524 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 LSM11P83369 360 aaKnown RBP eCLIP10.38□□□□□ -0.757e-9■■□□□ 11.8
RBM39-223ENST00000463004 TAF9Q16594 264 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 FBXW12Q6X9E4 464 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 FAM214BQ7L5A3 538 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 MSI2Q96DH6 328 aaKnown RBP10.38□□□□□ -0.75
RBM39-223ENST00000463004 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 OR2S2Q9NQN1 319 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 CYB5R1Q9UHQ9 305 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 LOC101059948A0A1B0GTJ6 334 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 PDCD6O75340 191 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 HLA-HP01893 362 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TGFBR1P36897 503 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 AKR1C8PQ5T2L2 129 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 CISD2Q8N5K1 135 aaKnown RBP10.38□□□□□ -0.75
RBM39-223ENST00000463004 KCNIP2Q9NS61 270 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 HELZP42694 1942 aaKnown RBP10.38□□□□□ -0.75
RBM39-223ENST00000463004 TRBV5-5A0A0J9YX44 114 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TMEM210A6NLX4 147 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TRAF3IP2O43734 574 aaPredicted RBP10.38□□□□□ -0.75
RBM39-223ENST00000463004 CTAG2O75638 210 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 C1QBP02746 253 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 HPNP05981 417 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 GABRA6Q16445 453 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
RBM39-223ENST00000463004 OR5A2Q8NGI9 324 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 CHST5Q9GZS9 411 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 ALDH3B1P43353 468 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 CCR6P51684 374 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TERB2Q8NHR7 220 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 FOXJ2Q9P0K8 574 aa10.38□□□□□ -0.75
RBM39-223ENST00000463004 TMEM272A0A1B0GTI8 110 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms