RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 H1FXQ92522 213 aaKnown RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 SPSB4Q96A44 273 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 C12orf43Q96C57 262 aaKnown RBP7.39□□□□□ -1.23
LDB1-203ENST00000461873 NRBF2Q96F24 287 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 MED30Q96HR3 178 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 CNTD2Q9H8S5 307 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 NOX4Q9NPH5 578 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 VNN3Q9NY84 501 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
LDB1-203ENST00000461873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.39□□□□□ -1.23
LDB1-203ENST00000461873 IGHV3OR15-7A0A075B7D8 119 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ZNF816-ZNF321PA0A0X1KG74 233 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 A0A1B0GUS0 222 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 A0A1B0GVI7 797 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 A0A1W2PPH5 198 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 A0A1W2PQ09 198 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ACOD1A6NK06 481 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 G3V2T6 193 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 DVL1O14640 695 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 CDIPTO14735 213 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 SPRY1O43609 319 aaPredicted RBP7.38□□□□□ -1.23
LDB1-203ENST00000461873 SELENOFO60613 162 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ZNF254O75437 659 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 PAHP00439 452 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 FSHBP01225 129 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
LDB1-203ENST00000461873 PRKACGP22612 351 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 GLRA1P23415 457 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 FASP25445 335 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 PSMB10P40306 273 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 OPRL1P41146 370 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 GABRA2P47869 451 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 CAPZA1P52907 286 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 CRISP1P54107 249 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
LDB1-203ENST00000461873 ARF6P62330 175 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 CDK5Q00535 292 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 RIPPLY1Q0D2K3 151 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 POU4F2Q12837 409 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 PRDX4Q13162 271 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 IKZF1Q13422 519 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 KLF17Q5JT82 389 aaPredicted RBP7.38□□□□□ -1.23
LDB1-203ENST00000461873 LINC01590Q5TEZ4 76 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 C16orf87Q6PH81 154 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 BRD3OSQ6XYD6 125 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 TMEM179BQ7Z7N9 219 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ZDHHC13Q8IUH4 622 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 GALNT4Q8N4A0 578 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 LHX4Q969G2 390 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ITFG2Q969R8 447 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 WDFY2Q96P53 400 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ADI1Q9BV57 179 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 YIPF3Q9GZM5 350 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 RASSF4Q9H2L5 321 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 DPAGT1Q9H3H5 408 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 ACOXLQ9NUZ1 547 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 RHBDD3Q9Y3P4 386 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 PCDHGB1Q9Y5G3 927 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
LDB1-203ENST00000461873 hCG_38984A0A1B0GV85 526 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 CLDN34H7C241 214 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 HOXA3O43365 443 aaPredicted RBP7.37□□□□□ -1.23
LDB1-203ENST00000461873 PTBP3O95758 552 aaKnown RBP7.37□□□□□ -1.23
LDB1-203ENST00000461873 PLATP00750 562 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 KNG1P01042 644 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 MRPL3P09001 348 aaKnown RBP7.37□□□□□ -1.23
LDB1-203ENST00000461873 FCGR1AP12314 374 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 ATP6V1B1P15313 513 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 NDUFB7P17568 137 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 CFHR2P36980 270 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 GNG3P63215 75 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 SLC9A3R2Q15599 337 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 TEX36Q5VZQ5 186 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 TMEM236Q5W0B7 351 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 PLCXD3Q63HM9 321 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 DEGS2Q6QHC5 323 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 C9orf139Q6ZV77 190 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 MOB3CQ70IA8 216 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 GID4Q8IVV7 300 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 HS3ST5Q8IZT8 346 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 OR10Z1Q8NGY1 313 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 OR4F5Q8NH21 305 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 OR5K1Q8NHB7 308 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 SSMEM1Q8WWF3 244 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 TMIGD2Q96BF3 282 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 KCTD12Q96CX2 325 aaKnown RBP7.37□□□□□ -1.23
LDB1-203ENST00000461873 CNN2Q99439 309 aaKnown RBP7.37□□□□□ -1.23
LDB1-203ENST00000461873 MNTQ99583 582 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 CCL13Q99616 98 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 SLC29A1Q99808 456 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 CIB1Q99828 191 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 ZNF747Q9BV97 191 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 PLEKHA1Q9HB21 404 aa7.37□□□□□ -1.23
LDB1-203ENST00000461873 BEX1Q9HBH7 125 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms