RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 RASD2Q96D21 266 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 RBM18Q96H35 190 aaKnown RBP3.36□□□□□ -1.87
CFHR3-204ENST00000461558 Q96M85 177 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 NMNAT3Q96T66 252 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 CNN2Q99439 309 aaKnown RBP3.36□□□□□ -1.87
CFHR3-204ENST00000461558 BEX2Q9BXY8 128 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 TTTY10Q9BZA0 68 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 RTN4RQ9BZR6 473 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 NXF5Q9H1B4 397 aaKnown RBP3.36□□□□□ -1.87
CFHR3-204ENST00000461558 OR10A4Q9H209 315 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 NIPAL2Q9H841 368 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 C12orf10Q9HB07 376 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 PLEKHA1Q9HB21 404 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 UBQLN4Q9NRR5 601 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 PLSCR3Q9NRY6 295 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 DDX28Q9NUL7 540 aaKnown RBP3.36□□□□□ -1.87
CFHR3-204ENST00000461558 ACOXLQ9NUZ1 547 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 ABRACLQ9P1F3 81 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 PRODH2Q9UF12 536 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 EPHA6Q9UF33 1036 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 PLCL2Q9UPR0 1127 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 KLHDC2Q9Y2U9 406 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 SLC6A5Q9Y345 797 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF337Q9Y3M9 751 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 MMACHCQ9Y4U1 282 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 CLCA3PQ9Y6N3 262 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 F5P12259 2224 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 PHF3Q92576 2039 aaKnown RBP3.36□□□□□ -1.87
CFHR3-204ENST00000461558 LAMA3Q16787 3333 aa3.36□□□□□ -1.87
CFHR3-204ENST00000461558 MYO9BQ13459 2157 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 CDH23Q9H251 3354 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 KIAA1549Q9HCM3 1950 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A0A087WV48 116 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A0A0B4J203 849 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 TRBV2A0A0J9YWF9 115 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 TRBV5-5A0A0J9YX44 114 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 hCG_1809904A0A1W2PP81 198 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A0A1W2PPE2 198 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A0A1W2PQD3 144 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A0A1W2PR64 198 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 FRG2CA6NGY1 282 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 A6NIN4 97 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 KLLNB2CW77 178 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 C17orf105B2RV13 164 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 IDSB3KWA1 339 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF879B4DU55 563 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 INMT-MINDY4F8WBC2 141 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 DCTN6O00399 190 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 TO15178 435 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 FLRT2O43155 660 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF264O43296 627 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 EEF1E1O43324 174 aaKnown RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 MBTPS2O43462 519 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ORC5O43913 435 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 UPK3AO75631 287 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ARL6IP5O75915 188 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 UBL3O95164 117 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 YES1P07947 543 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 CD14P08571 375 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 PNMTP11086 282 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ADRA2CP18825 462 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 S100A1P23297 94 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 EDNRAP25101 427 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 DPP4P27487 766 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ERP29P30040 261 aaKnown RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LCN1P31025 176 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 EVI2BP34910 448 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 RPL4P36578 427 aaKnown RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 AQP2P41181 271 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 PRPS1P60891 318 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF117Q03924 483 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 RPL18Q07020 188 aaKnown RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LGALS3BPQ08380 585 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 IL11RAQ14626 422 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 PON3Q15166 354 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ELOCQ15369 112 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 PNLIPRP3Q17RR3 467 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 C14orf28Q4W4Y0 310 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 HSD17B12Q53GQ0 312 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 CCDC92Q53HC0 331 aaPredicted RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 MESTQ5EB52 335 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 UBE2NLQ5JXB2 153 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF57Q68EA5 555 aaPredicted RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LAMTOR1Q6IAA8 161 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LEG1Q6P5S2 330 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 FAM199XQ6PEV8 388 aaPredicted RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 CBLN3Q6UW01 205 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 DNM1P46Q6ZS02 220 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 UTS2BQ765I0 119 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 GKN2Q86XP6 184 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 TIGD4Q8IY51 512 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 GCSAMQ8N6F7 178 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ASCC1Q8N9N2 400 aaKnown RBP3.35□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF383Q8NA42 475 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 GATSQ8NAP1 163 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 TSTD1Q8NFU3 115 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LILRB4Q8NHJ6 448 aa3.35□□□□□ -1.87
CFHR3-204ENST00000461558 LGALS14Q8TCE9 139 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms