RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 KIR3DL2P43630 455 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 ZNF154Q13106 437 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 Q6ZSR3 168 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 ZNF826PQ6ZT77 177 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 DOK3Q7L591 496 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 C8orf59Q8N0T1 100 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 MUC20Q8N307 709 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 KLHL36Q8N4N3 616 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 OR1M1Q8NGA1 313 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 OR14K1Q8NGZ2 314 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 HPSE2Q8WWQ2 592 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 C4orf36Q96KX1 117 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 NSD1Q96L73 2696 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 MYCBPQ99417 103 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 ZNF649Q9BS31 505 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 RTL8AQ9BWD3 113 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 FGF23Q9GZV9 251 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 LPAR2Q9HBW0 351 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 FGF20Q9NP95 211 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 ENPP5Q9UJA9 477 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 PCDHB10Q9UN67 800 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 PPIAL4AQ9Y536 164 aa16.83■□□□□ 0.28
SNAPC3-204ENST00000461041 FSTL3O95633 263 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 MSMBP08118 114 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 THBS2P35442 1172 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 DVL1P1P54792 670 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 HOXA4Q00056 320 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 C11orf53Q8IXP5 236 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 OR2G2Q8NGZ5 317 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 TFAP2CQ92754 450 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 PELI1Q96FA3 418 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 RNF170Q96K19 258 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 HIST1H2AAQ96QV6 131 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 PATZ1Q9HBE1 687 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM165Q9HC07 324 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM160Q9NX00 188 aa16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 FN1P02751 2386 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-204ENST00000461041 A0A1B0GVI7 797 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 hCG_1807616A0A1W2PRN6 198 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 DHRS7CA6NNS2 312 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 CRLF1O75462 422 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 HTR1AP08908 422 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 NANOS3P60323 173 aaKnown RBP16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 CSNK2BP67870 215 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 CEP78Q5JTW2 689 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 MOB3CQ70IA8 216 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 GLCCI1Q86VQ1 547 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 EGFL6Q8IUX8 553 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 SYS1Q8N2H4 156 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 BOLLQ8N9W6 283 aaKnown RBP16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 C19orf18Q8NEA5 215 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 OR51F2Q8NH61 342 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM246Q9BRR3 403 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 JAM3Q9BX67 310 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 TLNRD1Q9H1K6 362 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 METTL17Q9H7H0 456 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 ISG20L2Q9H9L3 353 aaKnown RBP16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 FRRS1LQ9P0K9 344 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 MALRD1Q5VYJ5 2156 aa16.81■□□□□ 0.28
SNAPC3-204ENST00000461041 IRGMA1A4Y4 181 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM210A6NLX4 147 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 CEACAM18A8MTB9 384 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 F5H0A9 414 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 H0YJX3 145 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 H3BSH0 61 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 SYT7O43581 403 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 PLPP2O43688 288 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 NRASP01111 189 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 UBCP0CG48 685 aaKnown RBP16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 AQP4P55087 323 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 CEACAM21Q3KPI0 293 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 ZNF404Q494X3 552 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 DMRTC1Q5HYR2 192 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 PLCXD3Q63HM9 321 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM42Q69YG0 159 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 KCTD8Q6ZWB6 473 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 GCSAMQ8N6F7 178 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM186Q96B77 213 aa16.8■□□□□ 0.28
SNAPC3-204ENST00000461041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■□□ 14.8
SNAPC3-204ENST00000461041 LOC107986453A0A1B0GWG9 222 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 A6NIN4 97 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 CDIPTO14735 213 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 LHBP01229 141 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 LIMS3P0CW19 117 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 LIMS4P0CW20 117 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 DCKP27707 260 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 CD80P33681 288 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 GPM6AP51674 278 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 CCR9P51686 369 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 GNG3P63215 75 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 FAM76BQ5HYJ3 339 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 CLVS2Q5SYC1 327 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 TMEM244Q5VVB8 128 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 LAIR2Q6ISS4 152 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 WDR82Q6UXN9 313 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 RDH10Q8IZV5 341 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 CCDC54Q8NEL0 328 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 DEFB108BQ8NET1 73 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 OR5A2Q8NGI9 324 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms