RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 OGFOD3Q6PK18 319 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 BTNL8Q6UX41 500 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CLEC18BQ6UXF7 455 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 TMEM200AQ86VY9 491 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 LINC00346Q8IVM7 164 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 POC1AQ8NBT0 407 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR5D14Q8NGL3 314 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 LYPD6BQ8NI32 183 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 BADQ92934 168 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 C1orf147Q96MC9 270 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 SCGB3A2Q96PL1 93 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR5B2Q96R09 309 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MAP3K3Q99759 626 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MICU1Q9BPX6 476 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 MRPL37Q9BZE1 423 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 OR8D2Q9GZM6 311 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 OPN3Q9H1Y3 402 aaPredicted RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 SLC26A1Q9H2B4 701 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PTGES2Q9H7Z7 377 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 PNO1Q9NRX1 252 aaKnown RBP7.53□□□□□ -1.2
VPS50-208ENST00000458707 GPR27Q9NS67 375 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 DZANK1Q9NVP4 752 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 CA14Q9ULX7 337 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 SRPK3Q9UPE1 567 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 FAM96BQ9Y3D0 163 aa7.53□□□□□ -1.2
VPS50-208ENST00000458707 ADAMTS20P59510 1910 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 C5orf52A6NGY3 159 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 ADAM10O14672 748 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 GMFGO60234 142 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 FBXO24O75426 580 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 ADAP1O75689 374 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 NUDT14O95848 222 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 OPN1LWP04000 364 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 HLA-DOBP13765 273 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 MYOGP15173 224 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 PTGFRP43088 359 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 LPAR6P43657 344 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 EMP2P54851 167 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 RAB5BP61020 215 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 TFF2Q03403 129 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 FMODQ06828 376 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 PLAC9Q5JTB6 97 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 TMEM268Q5VZI3 342 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 RTN4RL2Q86UN3 420 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 ANGPTL5Q86XS5 388 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 C9orf40Q8IXQ3 194 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 KDM8Q8N371 416 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 METTL27Q8N6F8 245 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 BHLHE23Q8NDY6 225 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 OR2I1PQ8NGU4 316 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 C2CD4CQ8TF44 421 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 OR10C1Q96KK4 312 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 CDCA3Q99618 268 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 WDR77Q9BQA1 342 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 RTBDNQ9BSG5 229 aaPredicted RBP7.52□□□□□ -1.21
VPS50-208ENST00000458707 NICN1Q9BSH3 213 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 TBL1XR1Q9BZK7 514 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 PBOV1Q9GZY1 135 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS50-208ENST00000458707 PARP11Q9NR21 331 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 SMCO4Q9NRQ5 59 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 PCDHGA1Q9Y5H4 931 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 TIMM10BQ9Y5J6 103 aa7.52□□□□□ -1.21
VPS50-208ENST00000458707 SPTY2D1-AS1A0A0U1RR47 76 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 TMEM150CB9EJG8 249 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 PRAMEF26H0Y7S4 382 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 SYT7O43581 403 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 FARS2O95363 451 aaKnown RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 HIST1H1DP16402 221 aaKnown RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 CAPZBP47756 277 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 RBP2P50120 134 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 DAP3P51398 398 aaKnown RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 FZD2Q14332 565 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ELAVL1Q15717 326 aaKnown RBP7.51□□□□□ -1.21
VPS50-208ENST00000458707 FAM189A2Q15884 450 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ANKRD55Q3KP44 614 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 AADACL3Q5VUY0 350 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 WDFY1Q8IWB7 410 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 ZNF248Q8NDW4 579 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 SLAMF6Q96DU3 332 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 GAL3ST4Q96RP7 486 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 OR11A1Q9GZK7 315 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 CHRNA10Q9GZZ6 450 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 KLHL13Q9P2N7 655 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 PISDQ9UG56 409 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 OSGIN2Q9Y236 505 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 IGKV1D-43A0A0B4J1Z2 117 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 FIGNL2A6NMB9 653 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 CDC14BO60729 498 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 LRP3O75074 770 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 CST4P01036 141 aa7.51□□□□□ -1.21
VPS50-208ENST00000458707 GAPDHP04406 335 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms