RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TERTO14746 1132 aaKnown RBP14.59□□□□□ -0.07
CCDC43-202ENST00000457422 ARPC5O15511 151 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CYTIPO60759 359 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 LIPCP11150 499 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CD34P28906 385 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 CBX5P45973 191 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 SNAI3Q3KNW1 292 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 SPINK14Q6IE38 97 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 OR4K15Q8NH41 348 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 SGK3Q96BR1 496 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 TM2D1Q9BX74 207 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 GSX2Q9BZM3 304 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 LRFN1Q9P244 771 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 KCNN3Q9UGI6 736 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 FREM2Q5SZK8 3169 aa14.59□□□□□ -0.07
CCDC43-202ENST00000457422 MYO7BQ6PIF6 2116 aa14.58□□□□□ -0.07
CCDC43-202ENST00000457422 LOC100509620A0A075B734 347 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 OR6C6A6NF89 314 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 OR2AT4A6NND4 320 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 STMND1H3BQB6 276 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 RAD51DO75771 328 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 IFNA6P05013 189 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 DLSTP36957 453 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 C3P1Q6ZMU1 363 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 C1QL2Q7Z5L3 287 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 OR1F12Q8NHA8 337 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 ARHGAP5-AS1Q96IT6 56 aa14.58□□□□□ -0.08
CCDC43-202ENST00000457422 FXYD6-FXYD2A0A087WZ82 144 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 RPA2P15927 270 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 HLXQ14774 488 aaPredicted RBP14.57□□□□□ -0.08
CCDC43-202ENST00000457422 MICBQ29980 383 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 NHLRC3Q5JS37 347 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 SFRP5Q5T4F7 317 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 ZNF774Q6NX45 483 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 TMUB2Q71RG4 321 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 HOGA1Q86XE5 327 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 ARRDC1Q8N5I2 433 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 MITD1Q8WV92 249 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 MARVELD3Q96A59 401 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 TMEM45BQ96B21 275 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 ZNF845Q96IR2 970 aaPredicted RBP14.57□□□□□ -0.08
CCDC43-202ENST00000457422 FOXB1Q99853 325 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 FXYD6Q9H0Q3 95 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 NOP16Q9Y3C1 178 aaKnown RBP14.57□□□□□ -0.08
CCDC43-202ENST00000457422 RTTNQ86VV8 2226 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 NCOR1O75376 2440 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 TRAV14DV4A0A0A6YYC5 116 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 C9orf170A2RU37 121 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 CEACAM18A8MTB9 384 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 NEURL1O76050 574 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 PMP2P02689 132 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 B4GALT1P15291 398 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 PPP3CBP16298 524 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 MGMTP16455 207 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 PPP1R1AQ13522 171 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 PDSS1Q5T2R2 415 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 TMEM164Q5U3C3 297 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.57□□□□□ -0.08
CCDC43-202ENST00000457422 SEMA6DQ8NFY4 1073 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 OR51T1Q8NGJ9 327 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 PIGTQ969N2 578 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 FBXW5Q969U6 566 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 FAM173AQ9BQD7 235 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 FAM117AQ9C073 453 aa14.57□□□□□ -0.08
CCDC43-202ENST00000457422 CDX4O14627 284 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-202ENST00000457422 RP2O75695 350 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 FCGR2AP12318 317 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ZNF32P17041 273 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 P2RX3P56373 397 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 RAB14P61106 215 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 SORDQ00796 357 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 HGFACQ04756 655 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 FGL1Q08830 312 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ARL6IP1Q15041 203 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 LIN54Q6MZP7 749 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 SULF2Q8IWU5 870 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ANGPTL6Q8NI99 470 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 SPSB1Q96BD6 273 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 FN3KRPQ9HA64 309 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ZNF391Q9UJN7 358 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 EFSO43281 561 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 CA11O75493 328 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 B3GALNT1O75752 331 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 PATE4P0C8F1 98 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 RFC3P40938 356 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 PCBD1P61457 104 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 CEACAM16Q2WEN9 425 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 TMEM65Q6PI78 240 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 OR2M7Q8NG81 312 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 OR10K1Q8NGX5 313 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 OR2AE1Q8NHA4 323 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 TERB2Q8NHR7 220 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ABHD3Q8WU67 409 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ST8SIA4Q92187 359 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 REEP6Q96HR9 211 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 SIGLEC12Q96PQ1 595 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 S100A13Q99584 98 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ARL6Q9H0F7 186 aa14.56□□□□□ -0.08
CCDC43-202ENST00000457422 ZNF703Q9H7S9 590 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-202ENST00000457422 GPR35Q9HC97 309 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms