RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 OR4K17Q8NGC6 315 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM41AQ96HV5 264 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PRRX2Q99811 253 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PRRT1Q99946 306 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 PBOV1Q9GZY1 135 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 WDR54Q9H977 334 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 FAM206AQ9NX38 181 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 MLXQ9UH92 298 aa10.94□□□□□ -0.66
LINC00959-201ENST00000456581 LOC102723996A0A087X1L8 192 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 E9PLN8 166 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 F8W036 122 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 CRHP06850 196 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 SLC25A4P12235 298 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 CRABP1P29762 137 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 BLOC1S1P78537 153 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 QRFPP83859 136 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF345Q14585 488 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 C1orf100Q5SVJ3 147 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 H3F3CQ6NXT2 135 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 RBMS3Q6XE24 437 aaKnown RBP10.93□□□□□ -0.66
LINC00959-201ENST00000456581 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 OR1M1Q8NGA1 313 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM230Q96A57 120 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 PIK3IP1Q96FE7 263 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 C5orf66Q9H5L9 145 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 PISDQ9UG56 409 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 CYB5R1Q9UHQ9 305 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 A0A0G2JMM0 328 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 A0A1W2PPB8 328 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 A0A1W2PRS3 328 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 METTL21EPA6NDL7 271 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 KIR3DP1A8MWS1 328 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 CRYBA1P05813 215 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 GLIPR1L1Q6UWM5 242 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 NAA40Q86UY6 237 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 OR10C1Q96KK4 312 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 KCNK17Q96T54 332 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 PROK2Q9HC23 129 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 SDHAF3Q9NRP4 125 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 CYTL1Q9NRR1 136 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 GSKIPQ9P0R6 139 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 NCKAP5O14513 1909 aa10.93□□□□□ -0.66
LINC00959-201ENST00000456581 IGHV3-15A0A0B4J1V0 119 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 A0A1W2PNU3 283 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 MEX3AA1L020 520 aaKnown RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 IL2RAP01589 272 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 PSMB6P28072 239 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 SSBP1Q04837 148 aaKnown RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 Q0VFX4 171 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF528Q3MIS6 628 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 NKAPLQ5M9Q1 402 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 DRAM2Q6UX65 266 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ABHD12BQ7Z5M8 362 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ST6GALNAC5Q9BVH7 336 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 TREM1Q9NP99 234 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ACKR4Q9NPB9 350 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 KLHL13Q9P2N7 655 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 RAB22AQ9UL26 194 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 LOXL2Q9Y4K0 774 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 PCSK5Q92824 1860 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 NSG1A0A0A6YYJ2 146 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 LOC390937A0A1W2PQ73 354 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 H7C2Y5 167 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 RER1O15258 196 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 TCN2P20062 427 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF93P35789 620 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 SUMO3P55854 103 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 SCRN3Q0VDG4 424 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ANKRD55Q3KP44 614 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 C1QL2Q7Z5L3 287 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 RXFP4Q8TDU9 374 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 LIN37Q96GY3 246 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 MRGPRX4Q96LA9 322 aa10.92□□□□□ -0.66
LINC00959-201ENST00000456581 ZFHX2Q9C0A1 2572 aaPredicted RBP10.92□□□□□ -0.66
LINC00959-201ENST00000456581 COL27A1Q8IZC6 1860 aaPredicted RBP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 IGHMP01871 453 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 GLRA1P23415 457 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 DAP3P51398 398 aaKnown RBP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM50BP56557 158 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 TRA2AQ13595 282 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 MEF2DQ14814 521 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 SGCAQ16586 387 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM156Q8N614 296 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 ARHGAP5-AS1Q96IT6 56 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF700Q9H0M5 742 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 LPAR5Q9H1C0 372 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 SLC6A15Q9H2J7 730 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 NXT1Q9UKK6 140 aaKnown RBP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 A6NIZ1 184 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 HSPB2A8KAH6 182 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 HOXB5P09067 269 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 FAM157CP0CG43 387 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 DAOP14920 347 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 MUC1P15941 1255 aaPredicted RBP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 357.3 ms