RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 GMFBP60983 142 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 PRDX4Q13162 271 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 IKZF1Q13422 519 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 KRT74Q7RTS7 529 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 GALNT4Q8N4A0 578 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 SCCPDHQ8NBX0 429 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 OTOSQ8NHW6 89 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 DYRK2Q92630 601 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 PAPOLGQ9BWT3 736 aaKnown RBP13.15□□□□□ -0.3
GPC1-206ENST00000455111 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 ELL3Q9HB65 397 aaPredicted RBP13.15□□□□□ -0.3
GPC1-206ENST00000455111 ZNRD1Q9P1U0 126 aa13.15□□□□□ -0.3
GPC1-206ENST00000455111 RIIAD1A6NNX1 92 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 AKR7A2O43488 359 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 DCTN3O75935 186 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 CST4P01036 141 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 ZNF3P17036 446 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 SLC15A1P46059 708 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 GINS1Q14691 196 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 MICBQ29980 383 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 C11orf91Q3C1V1 193 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 PLBD1Q6P4A8 553 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 METAP1DQ6UB28 335 aaPredicted RBP13.14□□□□□ -0.31
GPC1-206ENST00000455111 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
GPC1-206ENST00000455111 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 PGAM5Q96HS1 289 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 PKP2Q99959 881 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 CHID1Q9BWS9 393 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 HAO2Q9NYQ3 351 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 ZNF222Q9UK12 451 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 WNK1Q9H4A3 2382 aa13.14□□□□□ -0.31
GPC1-206ENST00000455111 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 TSPAN15O95858 294 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 IFNGP01579 166 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
GPC1-206ENST00000455111 BLVRAP53004 296 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 CDK5Q00535 292 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 MIDNQ504T8 468 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 BRICD5Q6PL45 260 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 OR52H1Q8NGJ2 320 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 TEX47Q8TBZ9 253 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 CANT1Q8WVQ1 401 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 C12orf43Q96C57 262 aaKnown RBP13.13□□□□□ -0.31
GPC1-206ENST00000455111 RBM4BQ9BQ04 359 aaKnown RBP13.13□□□□□ -0.31
GPC1-206ENST00000455111 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 MUC13Q9H3R2 512 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 SP140LQ9H930 580 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 ONECUT1Q9UBC0 465 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 MAB21L2Q9Y586 359 aa13.13□□□□□ -0.31
GPC1-206ENST00000455111 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 A0A1B0GVI7 797 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 H3BN98 237 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 TIPRLO75663 272 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 LYNP07948 512 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 H2BFMP0C1H6 154 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 RAP2AP10114 183 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 ALOX5APP20292 161 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 PRKACGP22612 351 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 PAX6P26367 422 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
GPC1-206ENST00000455111 MZT1Q08AG7 82 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 FAM98BQ52LJ0 330 aaKnown RBP13.12□□□□□ -0.31
GPC1-206ENST00000455111 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 SHFQ7M4L6 423 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 TRPM8Q7Z2W7 1104 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 CPOQ8IVL8 374 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 CSNK2A3Q8NEV1 391 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 TBC1D15Q8TC07 691 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 FAM206AQ9NX38 181 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 ZNF391Q9UJN7 358 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 MPC1Q9Y5U8 109 aa13.12□□□□□ -0.31
GPC1-206ENST00000455111 CCDC182A6NF36 153 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 PSMD9O00233 223 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 NPFFO15130 113 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 NDUFB3O43676 98 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 CST1P01037 141 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 CRYBA1P05813 215 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 RPL15P61313 204 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms