RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SLC1A7O00341 560 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 SYT7O43581 403 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 GBX2P52951 348 aaPredicted RBP23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 TMEM244Q5VVB8 128 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 TMPRSS11AQ6ZMR5 421 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 AHSA2Q719I0 299 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 PEG10Q86TG7 708 aaKnown RBP23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 WDR86Q86TI4 376 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 RDH10Q8IZV5 341 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 MICU1Q9BPX6 476 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 UFSP2Q9NUQ7 469 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 TEP1Q99973 2627 aaKnown RBP23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 ABCA1O95477 2261 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 OR4C45A6NMZ5 311 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 LY6G6DO95868 133 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 GRPP07492 148 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 TGM4P49221 684 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 MED21Q13503 144 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 OR2G6Q5TZ20 316 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 TMEM42Q69YG0 159 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 ZDHHC23Q8IYP9 409 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 KLHL36Q8N4N3 616 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 CLDND2Q8NHS1 167 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 HPSE2Q8WWQ2 592 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 HPS1Q92902 700 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 FGF23Q9GZV9 251 aaPredicted RBP23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 FN3KRPQ9HA64 309 aa23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 CHCHD3Q9NX63 227 aaKnown RBP23.56■■□□□ 1.36
SMARCC1-203ENST00000454240 LOC107986453A0A1B0GWG9 222 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 CYB5R3P00387 301 aaPredicted RBP23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 IGHV2-70P01814 119 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 FAM76BQ5HYJ3 339 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 CLEC9AQ6UXN8 241 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 C11orf53Q8IXP5 236 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 STX19Q8N4C7 294 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 RTL8AQ9BWD3 113 aa23.55■■□□□ 1.36
SMARCC1-203ENST00000454240 LRRC30A6NM36 301 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 H3BSH0 61 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 IGHV4-31P0DP07 118 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 ZNF12P17014 697 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 C21orf33P30042 268 aaPredicted RBP23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 IL2RGP31785 369 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 THBS2P35442 1172 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 ZNF154Q13106 437 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 CEACAM21Q3KPI0 293 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 ZNF485Q8NCK3 441 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 OR1M1Q8NGA1 313 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 OR11L1Q8NGX0 322 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 OR52N1Q8NH53 320 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 RNF170Q96K19 258 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 HIST1H2AAQ96QV6 131 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 ZNF184Q99676 751 aaPredicted RBP23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 NARFLQ9H6Q4 476 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 SCN3BQ9NY72 215 aa23.54■■□□□ 1.36
SMARCC1-203ENST00000454240 CSPG4Q6UVK1 2322 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 NRASP01111 189 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CCDC159P0C7I6 412 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 GTF2A1P52655 376 aaPredicted RBP23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CDH15P55291 814 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 LMO4P61968 165 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 BTG1P62324 171 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CCDC58Q4VC31 144 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CEP78Q5JTW2 689 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CLVS2Q5SYC1 327 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 MOB3CQ70IA8 216 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 LRRC28Q86X40 367 aaPredicted RBP23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 C1orf87Q8N0U7 546 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 OR5A2Q8NGI9 324 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 CNBD2Q96M20 576 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 TLNRD1Q9H1K6 362 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 C1orf123Q9NWV4 160 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 BABAM2Q9NXR7 383 aa23.53■■□□□ 1.36
SMARCC1-203ENST00000454240 ABCA2Q9BZC7 2435 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 A6NIN4 97 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 TMEM210A6NLX4 147 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 LMX1BO60663 402 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 FSTL3O95633 263 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 CDK1P06493 297 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 HEXAP06865 529 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 IRF2P14316 349 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 ZMYND11Q15326 602 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 RPS4Y2Q8TD47 263 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 C10orf35Q96D05 121 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 C1orf159Q96HA4 380 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 PAK1IP1Q9NWT1 392 aaPredicted RBP23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 RNF7Q9UBF6 113 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 PCDHGB5Q9Y5G0 923 aa23.52■■□□□ 1.36
SMARCC1-203ENST00000454240 A6NLC8 198 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 TMEM212A6NML5 194 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 PTGES3LE9PB15 166 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 ZFPL1O95159 310 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 GZMKP49863 264 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 SLC35A2P78381 396 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 RNLSQ5VYX0 342 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 XAF1Q6GPH4 301 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 RPL22L1Q6P5R6 122 aaKnown RBP23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF826PQ6ZT77 177 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 ZNF676Q8N7Q3 588 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 GATAD2BQ8WXI9 593 aa23.51■■□□□ 1.35
SMARCC1-203ENST00000454240 PLEKHA1Q9HB21 404 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms