RNA–Protein interactions for RNA: ENST00000453992.5

NCL-205, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-205ENST00000453992 LYNX1P0DP58 116 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 COL8A2P25067 703 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 GTF2A1P52655 376 aaPredicted RBP16.33■□□□□ 0.2
NCL-205ENST00000453992 CDH15P55291 814 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 TMEM33P57088 247 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 BDH1Q02338 343 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 SPRNQ5BIV9 151 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 TMEM42Q69YG0 159 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 OR5AK2Q8NH90 309 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 PIGCQ92535 297 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 SGCDQ92629 289 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 DVL3Q92997 716 aaPredicted RBP16.33■□□□□ 0.2
NCL-205ENST00000453992 SMIM19Q96E16 107 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 MICU1Q9BPX6 476 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 GCM1Q9NP62 436 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 ZNF275Q9NSD4 429 aaPredicted RBP16.33■□□□□ 0.2
NCL-205ENST00000453992 ERVK-18Q9QC07 812 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 PPP1R3CQ9UQK1 317 aa16.33■□□□□ 0.2
NCL-205ENST00000453992 CLDN25C9JDP6 229 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 OGG1O15527 345 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 MRPS14O60783 128 aaKnown RBP16.32■□□□□ 0.2
NCL-205ENST00000453992 LALBAP00709 142 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 ZNF181Q2M3W8 571 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 CLVS2Q5SYC1 327 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 XAF1Q6GPH4 301 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 RDH10Q8IZV5 341 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 Q8TCH9 128 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 OR5P3Q8WZ94 311 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 RTL8AQ9BWD3 113 aa16.32■□□□□ 0.2
NCL-205ENST00000453992 ACANP16112 2415 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 TRIM64A6NGJ6 449 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 TMEM210A6NLX4 147 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 MT-ND2P03891 347 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 EEF1B2P24534 225 aaKnown RBP16.31■□□□□ 0.2
NCL-205ENST00000453992 NR4A2P43354 598 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 ACSM1Q08AH1 577 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 DMKNQ6E0U4 476 aaPredicted RBP16.31■□□□□ 0.2
NCL-205ENST00000453992 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 PP6455Q8WZ26 134 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 CCL17Q92583 94 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 HPS1Q92902 700 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 TECTBQ96PL2 329 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 HIST1H2AAQ96QV6 131 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 PDCD1LG2Q9BQ51 273 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 BPESC1Q9GZL8 116 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 CHST5Q9GZS9 411 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 FN3KRPQ9HA64 309 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 TMEM106BQ9NUM4 274 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 LSM2Q9Y333 95 aaKnown RBP16.31■□□□□ 0.2
NCL-205ENST00000453992 CACNG2Q9Y698 323 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 CR1P17927 2039 aa16.31■□□□□ 0.2
NCL-205ENST00000453992 LOC100289279A0A1B0GTE1 492 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 OR5B21A6NL26 309 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 LRRC30A6NM36 301 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 GATBO75879 557 aaKnown RBP16.3■□□□□ 0.2
NCL-205ENST00000453992 NRASP01111 189 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 GPR6P46095 362 aaPredicted RBP16.3■□□□□ 0.2
NCL-205ENST00000453992 CEACAM21Q3KPI0 293 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 PLCXD3Q63HM9 321 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 MOGAT3Q86VF5 341 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 TIMD4Q96H15 378 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 PPP1R3EQ9H7J1 279 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 LRRC42Q9Y546 428 aa16.3■□□□□ 0.2
NCL-205ENST00000453992 A0A096LNT2 108 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 ANKRD61A6NGH8 418 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 CD1AP06126 327 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 SPHARQ15513 63 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 TBCEQ15813 527 aaPredicted RBP16.29■□□□□ 0.2
NCL-205ENST00000453992 PRAMEF6Q5VXH4 476 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 OR5A2Q8NGI9 324 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 OR51A4Q8NGJ6 313 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 OR13C3Q8NGS6 347 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 OR11L1Q8NGX0 322 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 OR10AC1Q8NH08 325 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 REG4Q9BYZ8 158 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 CCDC90BQ9GZT6 254 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 TLNRD1Q9H1K6 362 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 ZNF281Q9Y2X9 895 aa16.29■□□□□ 0.2
NCL-205ENST00000453992 SIRT4Q9Y6E7 314 aaPredicted RBP16.29■□□□□ 0.2
NCL-205ENST00000453992 H3BSH0 61 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 PPIHO43447 177 aaKnown RBP16.28■□□□□ 0.2
NCL-205ENST00000453992 PLPP2O43688 288 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 SERPINA3P01011 423 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 IRF2P14316 349 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 ZNF20P17024 532 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 GNG3P63215 75 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 LOXL1Q08397 574 aaPredicted RBP16.28■□□□□ 0.2
NCL-205ENST00000453992 ZNF154Q13106 437 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 MPPED2Q15777 294 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 FAM76BQ5HYJ3 339 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 CEP78Q5JTW2 689 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 MOB3CQ70IA8 216 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 UTS2BQ765I0 119 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 PEG10Q86TG7 708 aaKnown RBP16.28■□□□□ 0.2
NCL-205ENST00000453992 WDR86Q86TI4 376 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 C1orf87Q8N0U7 546 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 OR1M1Q8NGA1 313 aa16.28■□□□□ 0.2
NCL-205ENST00000453992 ZNF420Q8TAQ5 688 aaPredicted RBP16.28■□□□□ 0.2
NCL-205ENST00000453992 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms