RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 NDUFA5Q16718 116 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 PABPC1L2AQ5JQF8 200 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 DRAM2Q6UX65 266 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 BATF2Q8N1L9 274 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 MICU1Q9BPX6 476 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 ST6GALNAC5Q9BVH7 336 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 OR2H1Q9GZK4 316 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 WNT5BQ9H1J7 359 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 MCTS1Q9ULC4 181 aaKnown RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 SSX5O60225 188 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 IFNA6P05013 189 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 IL5P05113 134 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 HPNP05981 417 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 MGMTP16455 207 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 CRYGSP22914 178 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 GABRR1P24046 479 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 TMEM50BP56557 158 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 PMP22Q01453 160 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 SSBP1Q04837 148 aaKnown RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 LGALSLQ3ZCW2 172 aaPredicted RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 MCEMP1Q8IX19 187 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 CHST5Q9GZS9 411 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 EMC3Q9P0I2 261 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 UPB1Q9UBR1 384 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 ZNF230Q9UIE0 474 aaPredicted RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 V9GYS6 101 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 KLRC4-KLRK1H3BQV0 150 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 RAD51DO75771 328 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 OR4E1P0C645 316 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 BLVRBP30043 206 aaPredicted RBP10.27□□□□□ -0.77
VTA1-203ENST00000452973 THBS4P35443 961 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 LIN54Q6MZP7 749 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 CDH24Q86UP0 819 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 PP6455Q8WZ26 134 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 URM1Q9BTM9 101 aaKnown RBP10.27□□□□□ -0.77
VTA1-203ENST00000452973 DPCDQ9BVM2 203 aaPredicted RBP10.27□□□□□ -0.77
VTA1-203ENST00000452973 CST11Q9H112 138 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 ITGB1BP2Q9UKP3 347 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 SNRPGP15A8MWD9 76 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 DISC1C4P0D8 188 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 ZNF735P0CB33 412 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 CD79AP11912 226 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 ZNF35P13682 527 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 CD46P15529 392 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 ZNF708P17019 499 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 H2BFSP57053 126 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 SLC10A1Q14973 349 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 NKAPLQ5M9Q1 402 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
VTA1-203ENST00000452973 MED30Q96HR3 178 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 ZNF224Q9NZL3 707 aa10.27□□□□□ -0.77
VTA1-203ENST00000452973 KLF13Q9Y2Y9 288 aaPredicted RBP10.27□□□□□ -0.77
VTA1-203ENST00000452973 SLC22A5O76082 557 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 IGLV3-1P01715 115 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 CHRM2P08172 466 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 HIST1H1DP16402 221 aaKnown RBP10.26□□□□□ -0.77
VTA1-203ENST00000452973 ZNF92Q03936 586 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 ATPAF1Q5TC12 328 aaPredicted RBP10.26□□□□□ -0.77
VTA1-203ENST00000452973 DCAF12L2Q5VW00 463 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 CPEB3Q8NE35 698 aaKnown RBP10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR13C8Q8NGS7 320 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR4K15Q8NH41 348 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 LILRB4Q8NHJ6 448 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 IP6K3Q96PC2 410 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 PIPOXQ9P0Z9 390 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 G3V3Q6 166 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 CPN1P15169 458 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 AKR1C4P17516 323 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 RIPPLY1Q0D2K3 151 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 RIPPLY2Q5TAB7 128 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 CRIP3Q6Q6R5 217 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR2AK2Q8NG84 335 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR56B1Q8NGI3 324 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 PIGCQ92535 297 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 RADILQ96JH8 1075 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 SLX1AQ9BQ83 275 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 PLEKHA6Q9Y2H5 1048 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 ZNF318Q5VUA4 2279 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 NME2P1O60361 137 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 HTR3BO95264 441 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 HLA-AP01891 365 aaKnown RBP10.26□□□□□ -0.77
VTA1-203ENST00000452973 PRF1P14222 555 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 ZNF24P17028 368 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 SPINK2P20155 84 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 NME2P22392 152 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 VAMP1P23763 118 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 PCBD1P61457 104 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 ZNF766Q5HY98 468 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR2W3Q7Z3T1 314 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 ZNF100Q8IYN0 542 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 CASTOR1Q8WTX7 329 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 HAS2Q92819 552 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 SLC25A21Q9BQT8 299 aaPredicted RBP10.26□□□□□ -0.77
VTA1-203ENST00000452973 OR51B6Q9H340 312 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 VSIG4Q9Y279 399 aa10.26□□□□□ -0.77
VTA1-203ENST00000452973 GVINP1Q7Z2Y8 2422 aa10.25□□□□□ -0.77
VTA1-203ENST00000452973 OR6C6A6NF89 314 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms