RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZMYND11Q15326 602 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 FDX2Q6P4F2 183 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 THAP5Q7Z6K1 395 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 PHC2Q8IXK0 858 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 SYS1Q8N2H4 156 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 PRSS35Q8N3Z0 413 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 LINC01356Q8N9X3 169 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 GAL3ST1Q99999 423 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 ALG8Q9BVK2 526 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF665Q9H7R5 613 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 V9GYS6 101 aa16.76■□□□□ 0.27
COL9A3-202ENST00000452372 IRGMA1A4Y4 181 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 ISPDA4D126 451 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 DHRS7CA6NNS2 312 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 J3QLW9 94 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 FSTL3O95633 263 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 TGFAP01135 160 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 IFNA2P01563 188 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 IGHV2-5P01817 119 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 GRPP07492 148 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF16P17020 682 aaPredicted RBP16.75■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF19P17023 458 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 DCKP27707 260 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 MDH2P40926 338 aaKnown RBP16.75■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM155Q4W5P6 130 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 WDR38Q5JTN6 314 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
COL9A3-202ENST00000452372 DOK3Q7L591 496 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 OR14K1Q8NGZ2 314 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 OR2G2Q8NGZ5 317 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 FBLIM1Q8WUP2 373 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 OR5P3Q8WZ94 311 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 RAB39BQ96DA2 213 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 PELI1Q96FA3 418 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 C4orf36Q96KX1 117 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 JAM3Q9BX67 310 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 RNF7Q9UBF6 113 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 ENPP5Q9UJA9 477 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 CDC42EP3Q9UKI2 254 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 PIGLQ9Y2B2 252 aa16.75■□□□□ 0.27
COL9A3-202ENST00000452372 RNF212BA8MTL3 300 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 B4DSR2 109 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 FAM157AC9JC47 383 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 LIMS3P0CW19 117 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 LIMS4P0CW20 117 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 KIR3DL2P43630 455 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 AQP4P55087 323 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 ODF4Q2M2E3 257 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 WDR86Q86TI4 376 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 C11orf53Q8IXP5 236 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 ZDHHC23Q8IYP9 409 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 MUC20Q8N307 709 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-202ENST00000452372 SPICQ8N5J4 248 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 CCDC54Q8NEL0 328 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 OR1M1Q8NGA1 313 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 HIST1H2AAQ96QV6 131 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 RTL8AQ9BWD3 113 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 VCX3BQ9H321 246 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 C1orf123Q9NWV4 160 aa16.74■□□□□ 0.27
COL9A3-202ENST00000452372 PPIAL4EA0A075B759 164 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 A0A1B0GVI7 797 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 PPIAL4DF5H284 164 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 LMX1BO60663 402 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 HTR1AP08908 422 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 UBCP0CG48 685 aaKnown RBP16.73■□□□□ 0.27
COL9A3-202ENST00000452372 PPIAL4FP0DN26 164 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 FAHP16930 419 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 CCR9P51686 369 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 NANOS3P60323 173 aaKnown RBP16.73■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF154Q13106 437 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 FAM76BQ5HYJ3 339 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 LAIR2Q6ISS4 152 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 FAM166AQ6J272 317 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF826PQ6ZT77 177 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 KLHL36Q8N4N3 616 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 HPSE2Q8WWQ2 592 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 RNF170Q96K19 258 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 BEX2Q9BXY8 128 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 ISG20L2Q9H9L3 353 aaKnown RBP16.73■□□□□ 0.27
COL9A3-202ENST00000452372 UBAP1Q9NZ09 502 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 FRRS1LQ9P0K9 344 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 PPIAL4AQ9Y536 164 aa16.73■□□□□ 0.27
COL9A3-202ENST00000452372 A6NLC8 198 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM210A6NLX4 147 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 SYT7O43581 403 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 ZNF205O95201 554 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 ATP6V1G2O95670 118 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 THBS2P35442 1172 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 MRPL28Q13084 256 aaKnown RBP16.72■□□□□ 0.27
COL9A3-202ENST00000452372 CEACAM21Q3KPI0 293 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 FAM201AQ5SY85 155 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM244Q5VVB8 128 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 TMEM42Q69YG0 159 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 GGHQ92820 318 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 FGF23Q9GZV9 251 aaPredicted RBP16.72■□□□□ 0.27
COL9A3-202ENST00000452372 TLNRD1Q9H1K6 362 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 PATZ1Q9HBE1 687 aaKnown RBP16.72■□□□□ 0.27
COL9A3-202ENST00000452372 PLCXD1Q9NUJ7 323 aa16.72■□□□□ 0.27
COL9A3-202ENST00000452372 PCDHB10Q9UN67 800 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms