RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 OR2T27Q8NH04 317 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 SPATA3Q8NHX4 192 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 RAB40AQ8WXH6 277 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 RFKQ969G6 155 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 RNF170Q96K19 258 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 FAM71F1Q96KD3 344 aaPredicted RBP10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 RTL8AQ9BWD3 113 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 TLNRD1Q9H1K6 362 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 IMPAD1Q9NX62 359 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 CTSZQ9UBR2 303 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 OR5V1Q9UGF6 321 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 AUP1Q9Y679 476 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 R4GMQ9 66 aa10.62□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF816-ZNF321PA0A0X1KG74 233 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 NDUFA2O43678 99 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ENTPD6O75354 484 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 RPP14O95059 124 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 GYPAP02724 150 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ATP6V1B1P15313 513 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ATP6V1E1P36543 226 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 CFHR2P36980 270 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SNRPGP62308 76 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 RIPPLY1Q0D2K3 151 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SCGB2A2Q13296 93 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 FAM76BQ5HYJ3 339 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 DMRTC1Q5HYR2 192 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SLC25A30Q5SVS4 291 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 COMMD2Q86X83 199 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ZDHHC23Q8IYP9 409 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 YIPF7Q8N8F6 280 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SCCPDHQ8NBX0 429 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SEMA6DQ8NFY4 1073 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 OR10H4Q8NGA5 316 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 HPSE2Q8WWQ2 592 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 RPL3LQ92901 407 aaKnown RBP10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 MBOAT4Q96T53 435 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 C9orf16Q9BUW7 83 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 ABCB9Q9NP78 766 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 AASSQ9UDR5 926 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 OR52A1Q9UKL2 312 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 GTF2A1LQ9UNN4 478 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 SNX5Q9Y5X3 404 aa10.61□□□□□ -0.71
PRPF40A-203ENST00000448428 IGHV2-70DA0A0C4DH43 119 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 KIR2DS1A0A191URI9 304 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 A0A1B0GTI1 187 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 METTL15A6NJ78 407 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 TMEM210A6NLX4 147 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 ADAM20O43506 726 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 RGS9O75916 674 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 VENTXO95231 258 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 KRT8P05787 483 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 FAHP16930 419 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 GPM6AP51674 278 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 OCLNQ16625 522 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 KLF17Q5JT82 389 aaPredicted RBP10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 CEP78Q5JTW2 689 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 ZBTB49Q6ZSB9 765 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 KCTD8Q6ZWB6 473 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 HIST1H2AAQ96QV6 131 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 MRI1Q9BV20 369 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 TRIM36Q9NQ86 728 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 SLC22A13Q9Y226 551 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 PIGLQ9Y2B2 252 aa10.6□□□□□ -0.71
PRPF40A-203ENST00000448428 ATRQ13535 2644 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 A0A0A6YYJ9 748 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 SRRM5B3KS81 715 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF732B4DXR9 585 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 P2RY10O00398 339 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MTRF1O75570 445 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 FCN3O75636 299 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 SULT1C4O75897 302 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 DHRS3O75911 302 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 BAG2O95816 211 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MUC1P15941 1255 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MTNR1AP48039 350 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 NPY4RP50391 375 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 ELF3P78545 371 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 ZNF85Q03923 595 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MICBQ29980 383 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 CEACAM21Q3KPI0 293 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 ZBTB37Q5TC79 503 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MEDAGQ5VYS4 303 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 BTNL3Q6UXE8 466 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 MOB3CQ70IA8 216 aa10.59□□□□□ -0.71
PRPF40A-203ENST00000448428 THAP5Q7Z6K1 395 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms