RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 C1orf146Q5VVC0 180 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 BCDIN3DQ7Z5W3 292 aaKnown RBP14.67□□□□□ -0.06
DDX56-207ENST00000448192 COMMD2Q86X83 199 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 RPL3LQ92901 407 aaKnown RBP14.67□□□□□ -0.06
DDX56-207ENST00000448192 RNF170Q96K19 258 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 TLNRD1Q9H1K6 362 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 ABCB9Q9NP78 766 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 H2AFY2Q9P0M6 372 aaPredicted RBP14.67□□□□□ -0.06
DDX56-207ENST00000448192 AP4S1Q9Y587 144 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 TMEM14AQ9Y6G1 99 aa14.67□□□□□ -0.06
DDX56-207ENST00000448192 A0A1B0GW55 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 TMEM210A6NLX4 147 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.66□□□□□ -0.06
DDX56-207ENST00000448192 FCN3O75636 299 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ATP5HO75947 161 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L2P0CJ85 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L3P0CJ86 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L4P0CJ87 422 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L5P0CJ88 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L6P0CJ89 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L7P0CJ90 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 HKR1P10072 659 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 FASP25445 335 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 MAP2K3P46734 347 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ARF6P62330 175 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 SLC9A3R2Q15599 337 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 METTL11BQ5VVY1 283 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DEGS2Q6QHC5 323 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4L9Q6RFH8 374 aaPredicted RBP14.66□□□□□ -0.06
DDX56-207ENST00000448192 MEPCEQ7L2J0 689 aaKnown RBP14.66□□□□□ -0.06
DDX56-207ENST00000448192 AMIGO2Q86SJ2 522 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ZDHHC13Q8IUH4 622 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ZDHHC23Q8IYP9 409 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 FGFRL1Q8N441 504 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 TCEANCQ8N8B7 351 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 SCCPDHQ8NBX0 429 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 OR5T2Q8NGG2 359 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 ZDHHC16Q969W1 377 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 WDFY2Q96P53 400 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 HIST1H2AAQ96QV6 131 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 CNN2Q99439 309 aaKnown RBP14.66□□□□□ -0.06
DDX56-207ENST00000448192 FAM206AQ9NX38 181 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 KAAG1Q9UBP8 84 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 DUX4Q9UBX2 424 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 IKZF2Q9UKS7 526 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 COPS3Q9UNS2 423 aa14.66□□□□□ -0.06
DDX56-207ENST00000448192 A0A0U1RQV5 110 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 ACOD1A6NK06 481 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 PRR32B1ATL7 298 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 SRRM5B3KS81 715 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 P2RY10O00398 339 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 ECDO95905 644 aaPredicted RBP14.65□□□□□ -0.06
DDX56-207ENST00000448192 RNASE1P07998 156 aaKnown RBP14.65□□□□□ -0.06
DDX56-207ENST00000448192 EPHA2P29317 976 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 RIDAP52758 137 aaKnown RBP14.65□□□□□ -0.06
DDX56-207ENST00000448192 FOXL1Q12952 345 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 DEFB112Q30KQ8 113 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 SLX4IPQ5VYV7 408 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 RUSC1-AS1Q66K80 236 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 SLC36A1Q7Z2H8 476 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 ZNF679Q8IYX0 411 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 FAM216BQ8N7L0 139 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 HPSE2Q8WWQ2 592 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 ASB17Q8WXJ9 295 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 FAM71F1Q96KD3 344 aaPredicted RBP14.65□□□□□ -0.06
DDX56-207ENST00000448192 OR8B4Q96RC9 309 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 IL4I1Q96RQ9 567 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 TBX15Q96SF7 602 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 PBOV1Q9GZY1 135 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 SNTG1Q9NSN8 517 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 HAO2Q9NYQ3 351 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 DNAJB11Q9UBS4 358 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 GTF2A1LQ9UNN4 478 aa14.65□□□□□ -0.06
DDX56-207ENST00000448192 ZNF816-ZNF321PA0A0X1KG74 233 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 ZAR1LA6NP61 321 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 CLDN34H7C241 214 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 AKR7A2O43488 359 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 NDUFB3O43676 98 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 ZNF254O75437 659 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 MMP9P14780 707 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 GPM6AP51674 278 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 BPIFB3P59826 476 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 ROM1Q03395 351 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 IKZF1Q13422 519 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 ZNF829Q3KNS6 432 aaPredicted RBP14.64□□□□□ -0.07
DDX56-207ENST00000448192 CEP78Q5JTW2 689 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 KDM4DQ6B0I6 523 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 THAP5Q7Z6K1 395 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 OR10Z1Q8NGY1 313 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 TMEM163Q8TC26 289 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 OR51E1Q8TCB6 317 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 LRTOMTQ8WZ04 291 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 PPP1R14AQ96A00 147 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 C12orf43Q96C57 262 aaKnown RBP14.64□□□□□ -0.07
DDX56-207ENST00000448192 FGF23Q9GZV9 251 aaPredicted RBP14.64□□□□□ -0.07
DDX56-207ENST00000448192 SIRPDQ9H106 197 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 WDR13Q9H1Z4 485 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 GPR84Q9NQS5 396 aa14.64□□□□□ -0.07
DDX56-207ENST00000448192 RPUSD1Q9UJJ7 312 aaKnown RBP14.64□□□□□ -0.07
DDX56-207ENST00000448192 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms