RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PLCXD3Q63HM9 321 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 TMEM42Q69YG0 159 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 GPR141Q7Z602 305 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 ZDHHC23Q8IYP9 409 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 FTMTQ8N4E7 242 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 PARP16Q8N5Y8 322 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR13C9Q8NGT0 318 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 ITFG2Q969R8 447 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 C10orf35Q96D05 121 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 ELMOD3Q96FG2 381 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 CCL19Q99731 98 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 VRK1Q99986 396 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 CHST5Q9GZS9 411 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 CGGBP1Q9UFW8 167 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 STUB1Q9UNE7 303 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 MPC1Q9Y5U8 109 aa15.3■□□□□ 0.04
TRAPPC4-203ENST00000447216 TANC2Q9HCD6 1990 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 TRAV8-7A0A075B6U6 113 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 PPOXP50336 477 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 CD200R1LQ6Q8B3 271 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 KRT74Q7RTS7 529 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 TRMT10AQ8TBZ6 339 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 HPSE2Q8WWQ2 592 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 IGFBPL1Q8WX77 278 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 PP6455Q8WZ26 134 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 RPL3LQ92901 407 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 CHCHD6Q9BRQ6 235 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 FUNDC2Q9BWH2 189 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 ZCCHC4Q9H5U6 513 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 PLEKHA6Q9Y2H5 1048 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 PMF1-BGLAPU3KQ54 211 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 ANKRD17O75179 2603 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 UNC79Q9P2D8 2635 aa15.29■□□□□ 0.04
TRAPPC4-203ENST00000447216 IGKV1-9A0A0C4DH69 117 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 LOC100506127A0A0U1RQW1 187 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 A0A1B0GWJ7 208 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 TRDV1A0A1B0GX56 115 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 GATBO75879 557 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 UCHL1P09936 223 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 ATF1P18846 271 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 C22orf42Q6IC83 251 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 PAMR1Q6UXH9 720 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 UTS2BQ765I0 119 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 SERPINA12Q8IW75 414 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR51A2Q8NGJ7 313 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR8S1Q8NH09 359 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 ITLN1Q8WWA0 313 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR5P3Q8WZ94 311 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 ITPKCQ96DU7 683 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 NAA50Q9GZZ1 169 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 SLC22A4Q9H015 551 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 MS4A5Q9H3V2 200 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 RNF167Q9H6Y7 350 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 ZDHHC8Q9ULC8 765 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 SSR3Q9UNL2 185 aa15.28■□□□□ 0.04
TRAPPC4-203ENST00000447216 ANXA2P2A6NMY6 339 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 NCR1O76036 304 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 THBS2P35442 1172 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 CCL8P80075 99 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 TNFAIP6P98066 277 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 HNRNPA0Q13151 305 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 HSD17B12Q53GQ0 312 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 GPR107Q5VW38 600 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR1M1Q8NGA1 313 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 OR5D14Q8NGL3 314 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 RNF170Q96K19 258 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 SORCS2Q96PQ0 1159 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 HIST1H2AAQ96QV6 131 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 MICU1Q9BPX6 476 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 CXXC4Q9H2H0 198 aa15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 TXNL4BQ9NX01 149 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-203ENST00000447216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 FAM230AA0A1W2PPH8 454 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 OVOL3O00110 214 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 TPD52L2O43399 206 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 SULT1B1O43704 296 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 NDUFS7O75251 213 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 BMP4P12644 408 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 IGFBP3P17936 291 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 FSTP19883 344 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 AZGP1P25311 298 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 RBMXP38159 391 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 GPM6AP51674 278 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 LSM3P62310 102 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 CEACAM21Q3KPI0 293 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 PRAMEF6Q5VXH4 476 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 RNF144BQ7Z419 303 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 WDR86Q86TI4 376 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 THRSPQ92748 146 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 MEGF10Q96KG7 1140 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 SPACA5Q96QH8 159 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 OR2V2Q96R30 315 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 NKX3-1Q99801 234 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 RTL8AQ9BWD3 113 aa15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 NOP16Q9Y3C1 178 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-203ENST00000447216 LOC100289279A0A1B0GTE1 492 aa15.25■□□□□ 0.03
TRAPPC4-203ENST00000447216 ZNF732B4DXR9 585 aa15.25■□□□□ 0.03
TRAPPC4-203ENST00000447216 AIREO43918 545 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms