RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PRDX4Q13162 271 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 NXNL2Q5VZ03 156 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 RUSC1-AS1Q66K80 236 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 C12orf73Q69YU5 71 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 DEGS2Q6QHC5 323 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 NLRC3Q7RTR2 1065 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 GID4Q8IVV7 300 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 OR8S1Q8NH09 359 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 TMEM163Q8TC26 289 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 ASB17Q8WXJ9 295 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 RPL3LQ92901 407 aaKnown RBP9.01□□□□□ -0.97
SF3A1-203ENST00000444440 STMN2Q93045 179 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 TBX15Q96SF7 602 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 MNTQ99583 582 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 PAPOLGQ9BWT3 736 aaKnown RBP9.01□□□□□ -0.97
SF3A1-203ENST00000444440 TLNRD1Q9H1K6 362 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 WDR13Q9H1Z4 485 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 RIBC2Q9H4K1 309 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 S100A14Q9HCY8 104 aa9.01□□□□□ -0.97
SF3A1-203ENST00000444440 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9□□□□□ -0.97
SF3A1-203ENST00000444440 ACOD1A6NK06 481 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 H3BNX3 289 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 DVL1O14640 695 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 CDIPTO14735 213 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 ZNF254O75437 659 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 IGLV3-1P01715 115 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 PPIAL4GP0DN37 164 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 CPT2P23786 658 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 FPR2P25090 351 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 DCTDP32321 178 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 POLR2IP36954 125 aaKnown RBP9□□□□□ -0.97
SF3A1-203ENST00000444440 CDC42P60953 191 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 GMFBP60983 142 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 SNCBQ16143 134 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 WDR38Q5JTN6 314 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 AADACL4Q5VUY2 407 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 BTNL3Q6UXE8 466 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 PLEKHG7Q6ZR37 379 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 SSX6Q7RTT6 188 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 SPERTQ8NA61 448 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 OR8J1Q8NGP2 316 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 TRUB1Q8WWH5 349 aaKnown RBP9□□□□□ -0.97
SF3A1-203ENST00000444440 OR5P3Q8WZ94 311 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 RFKQ969G6 155 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 IL4I1Q96RQ9 567 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 CNN2Q99439 309 aaKnown RBP9□□□□□ -0.97
SF3A1-203ENST00000444440 CCL13Q99616 98 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 C9orf16Q9BUW7 83 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 GABARAPL3Q9BY60 117 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 MROQ9BYG7 248 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 SIRPDQ9H106 197 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 ADGRL4Q9HBW9 690 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 C14orf119Q9NWQ9 140 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 HAO2Q9NYQ3 351 aa9□□□□□ -0.97
SF3A1-203ENST00000444440 SRRM5B3KS81 715 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 BAG2O95816 211 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 CST4P01036 141 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ALPLP05186 524 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 PRTN3P24158 256 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ATP6V1E1P36543 226 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 CFHR2P36980 270 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ALDH3A2P51648 485 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 DLX1P56177 255 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ROM1Q03395 351 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 PRB3Q04118 309 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-203ENST00000444440 BAMBIQ13145 260 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 SLC9A3R2Q15599 337 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 DEFB112Q30KQ8 113 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 AWAT1Q58HT5 328 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 CEP78Q5JTW2 689 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ZBTB49Q6ZSB9 765 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 BTN2A1Q7KYR7 527 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 GALNT4Q8N4A0 578 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 FTMTQ8N4E7 242 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 SCCPDHQ8NBX0 429 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 CSNK2A3Q8NEV1 391 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 OR5T2Q8NGG2 359 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 PIGCQ92535 297 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 GCDHQ92947 438 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ITFG2Q969R8 447 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 OR8B4Q96RC9 309 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 JMJD8Q96S16 334 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 APOL4Q9BPW4 351 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 PCGF1Q9BSM1 259 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 MS4A7Q9GZW8 240 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-203ENST00000444440 RGCCQ9H4X1 137 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 RNPEPL1Q9HAU8 725 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 SNTG1Q9NSN8 517 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 IMPAD1Q9NX62 359 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 USE1Q9NZ43 259 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 KAAG1Q9UBP8 84 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 WARS2Q9UGM6 360 aaKnown RBP8.99□□□□□ -0.97
SF3A1-203ENST00000444440 ZNF391Q9UJN7 358 aa8.99□□□□□ -0.97
SF3A1-203ENST00000444440 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms