RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 DNAJB11Q9UBS4 358 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 MTFP1Q9UDX5 166 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 PCDHGA9Q9Y5G4 932 aaKnown RBP9.34□□□□□ -0.91
CALD1-210ENST00000443197 LHFPL6Q9Y693 200 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.34□□□□□ -0.91
CALD1-210ENST00000443197 A0A1B0GV50 99 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 C9orf172C9J069 976 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 EFNA2O43921 213 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ZNF205O95201 554 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 UBBP0CG47 229 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 EPHA1P21709 976 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 PTGFRP43088 359 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 GPM6AP51674 278 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ELP2Q6IA86 826 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ARHGEF39Q8N4T4 335 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ZNF441Q8N8Z8 693 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 OR56B2PQ8NGI1 322 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 SARAFQ96BY9 339 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 SMIM3Q9BZL3 60 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 PRMT8Q9NR22 394 aaPredicted RBP9.34□□□□□ -0.91
CALD1-210ENST00000443197 PLSCR5A0PG75 271 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 BPNT1O95861 308 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 SP1P08047 785 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 RAB35Q15286 201 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 DRAM2Q6UX65 266 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 C6orf201Q7Z4U5 140 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 DNTTIP1Q9H147 329 aa9.34□□□□□ -0.91
CALD1-210ENST00000443197 ZNF71Q9NQZ8 489 aaPredicted RBP9.34□□□□□ -0.91
CALD1-210ENST00000443197 TRAV17A0A0B4J275 112 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SOCS1O15524 211 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 EFSO43281 561 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 NXPH2O95156 264 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SLC34A2O95436 690 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 TAS2R46P59540 309 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 TBC1D28Q2M2D7 210 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 OR2T2Q6IF00 324 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 LRRC20Q8TCA0 184 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 LOXL4Q96JB6 756 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SYT3Q9BQG1 590 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SOX7Q9BT81 388 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 NTN3O00634 580 aaPredicted RBP9.33□□□□□ -0.92
CALD1-210ENST00000443197 C1QBP02746 253 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 PRKACAP17612 351 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 CXCL3P19876 107 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
CALD1-210ENST00000443197 GZMKP49863 264 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 PPA1Q15181 289 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 PP6455Q8WZ26 134 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CALD1-210ENST00000443197 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SCPEP1Q9HB40 452 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 ZNF286AQ9HBT8 521 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 COQ3Q9NZJ6 369 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 ELF5Q9UKW6 265 aaPredicted RBP9.33□□□□□ -0.92
CALD1-210ENST00000443197 FZR1Q9UM11 496 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 FLVCR1Q9Y5Y0 555 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 TRIOO75962 3097 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 HLA-DQB1P01920 261 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 HPXP02790 462 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 ZNF806P0C7X5 589 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 RPA2P15927 270 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 AKR1C2P52895 323 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 DEFA5Q01523 94 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 FGL1Q08830 312 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 PLA2G7Q13093 441 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 CXorf67Q86X51 503 aaPredicted RBP9.33□□□□□ -0.92
CALD1-210ENST00000443197 SLC25A38Q96DW6 304 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 SLC7A10Q9NS82 523 aa9.33□□□□□ -0.92
CALD1-210ENST00000443197 ZNF732B4DXR9 585 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 ZIC3O60481 467 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 OR4E1P0C645 316 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 AGTR1P30556 359 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 GABRA2P47869 451 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 RPS11P62280 158 aaKnown RBP eCLIP9.32□□□□□ -0.92
CALD1-210ENST00000443197 LSM6P62312 80 aaKnown RBP9.32□□□□□ -0.92
CALD1-210ENST00000443197 ROM1Q03395 351 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 PLEKHN1Q494U1 663 aaPredicted RBP9.32□□□□□ -0.92
CALD1-210ENST00000443197 CLVS2Q5SYC1 327 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 OR4D10Q8NGI6 311 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 ST6GAL2Q96JF0 529 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 BCO1Q9HAY6 547 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 TRAPPC2LQ9UL33 140 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 NPIPB7O75200 414 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 TK1P04183 234 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 OPCMLQ14982 345 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 GSG1Q2KHT4 349 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 ALKBH6Q3KRA9 238 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 HIKESHIQ53FT3 197 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 DUSP18Q8NEJ0 188 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 EMG1Q92979 244 aaKnown RBP9.32□□□□□ -0.92
CALD1-210ENST00000443197 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
CALD1-210ENST00000443197 FAAP24Q9BTP7 215 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 DDA1Q9BW61 102 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 GPR35Q9HC97 309 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 GLS2Q9UI32 602 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 LHX6Q9UPM6 363 aa9.32□□□□□ -0.92
CALD1-210ENST00000443197 LY6G6EA0A0G2JKS1 128 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms