RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CYB561D1Q8N8Q1 229 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF248Q8NDW4 579 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 TERB2Q8NHR7 220 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 FNDC9Q8TBE3 224 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 MESP1Q9BRJ9 268 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 PBDC1Q9BVG4 233 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 TMUB1Q9BVT8 246 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 NMES1Q9C002 83 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SLC26A1Q9H2B4 701 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 SRMSQ9H3Y6 488 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 RIMS4Q9H426 269 aaPredicted RBP6.7□□□□□ -1.34
HDAC9-214ENST00000441542 RHBDD3Q9Y3P4 386 aa6.7□□□□□ -1.34
HDAC9-214ENST00000441542 AHRRA9YTQ3 701 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SFT2D2O95562 160 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 C8AP07357 584 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SLC35A1P78382 337 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF658BQ4V348 819 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 DNM1P46Q6ZS02 220 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PEG10Q86TG7 708 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CDC20BQ86Y33 519 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM217Q8N7C4 229 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 EXD3Q8N9H8 876 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 STT3BQ8TCJ2 826 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SLC39A7Q92504 469 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 MUCL1Q96DR8 90 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TSPAN32Q96QS1 320 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 NEU1Q99519 415 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PRRX2Q99811 253 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CHST11Q9NPF2 352 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SPHK2Q9NRA0 654 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SLC5A6Q9Y289 635 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 YBX2Q9Y2T7 364 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF106Q9H2Y7 1883 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM269A0A1B0GVZ9 245 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CDC14CA4D256 554 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF724A8MTY0 619 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 K7EQS6 105 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TGM5O43548 720 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SCGB1D1O95968 90 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PET100P0DJ07 73 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CD200P41217 278 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 RPS4XP62701 263 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 GLO1Q04760 184 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SPEM2Q0P670 501 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZIC1Q15915 447 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF260Q3ZCT1 412 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SLC35D3Q5M8T2 416 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 METRNLQ641Q3 311 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 VITQ6UXI7 678 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF429Q86V71 674 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 MRPL41Q8IXM3 137 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZDHHC22Q8N966 263 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 GPBAR1Q8TDU6 330 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 HAS2Q92819 552 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 FAM210BQ96KR6 192 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 MRGPRX3Q96LB0 322 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 AQP10Q96PS8 301 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 HIST1H2BLQ99880 126 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SF3B5Q9BWJ5 86 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 OPN3Q9H1Y3 402 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 WFDC1Q9HC57 220 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 HIF3AQ9Y2N7 669 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 MEMO1Q9Y316 297 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 INSL6Q9Y581 213 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SPEGQ15772 3267 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TET1Q8NFU7 2136 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 HEATR5AQ86XA9 2040 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PLXNA3P51805 1871 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 BORCS7-ASMTA0A0B4J1R7 106 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF705FA8MVS1 300 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SLC31A1O15431 190 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 JTBO76095 146 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 AK1P00568 194 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF705DP0CH99 300 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF705BP0CI00 300 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CD33P20138 364 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 CXCR1P25024 350 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PEBP1P30086 187 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 NOVA1P51513 510 aaKnown RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 RAC3P60763 192 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PRPS1P60891 318 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 RAB11AP62491 216 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 UNC119Q13432 240 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ELOBQ15370 118 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PHLDA2Q53GA4 152 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 DMRTA1Q5VZB9 504 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ARMC6Q6NXE6 501 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM156Q8N614 296 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ABHD5Q8WTS1 349 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 SPACA9Q96E40 222 aaPredicted RBP6.69□□□□□ -1.34
HDAC9-214ENST00000441542 GALNT14Q96FL9 552 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 ZNF558Q96NG5 402 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 TMEM106CQ9BVX2 250 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 PRODH2Q9UF12 536 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 HHLA2Q9UM44 414 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 Q9Y3F1 56 aa6.69□□□□□ -1.34
HDAC9-214ENST00000441542 LRP12Q9Y561 859 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms