RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DUX4L5P0CJ88 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L6P0CJ89 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L7P0CJ90 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 AMY2BP19961 511 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 CRISP1P54107 249 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 IL13RA1P78552 427 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 PDCD1Q15116 288 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 METTL11BQ5VVY1 283 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 RUSC1-AS1Q66K80 236 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 C16orf87Q6PH81 154 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DEGS2Q6QHC5 323 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4L9Q6RFH8 374 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 SHISA2Q6UWI4 295 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 KRT74Q7RTS7 529 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 FGFRL1Q8N441 504 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 UTP4Q969X6 686 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 PKP2Q99959 881 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 FGF23Q9GZV9 251 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 NOX4Q9NPH5 578 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 PAPOLBQ9NRJ5 636 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 TVP23BQ9NYZ1 205 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 KIF17Q9P2E2 1029 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 DUX4Q9UBX2 424 aa16.78■□□□□ 0.28
NCKIPSD-206ENST00000439518 CCDC182A6NF36 153 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 ACOD1A6NK06 481 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 TMEM210A6NLX4 147 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 GSC2O15499 205 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 TGM4P49221 684 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 DAPP51397 102 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 ARF6P62330 175 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 SNAPC1Q16533 368 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 ATPAF1Q5TC12 328 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 STUMQ69YW2 141 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 Q6YL49 198 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 KRT77Q7Z794 578 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 LY6G5BQ8NDX9 201 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 OR10Z1Q8NGY1 313 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 HPSE2Q8WWQ2 592 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 ST8SIA4Q92187 359 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 TAF15Q92804 592 aaKnown RBP eCLIP16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 ZDHHC16Q969W1 377 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 CADM1Q9BY67 442 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 CNTD2Q9H8S5 307 aa16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 UNKLQ9H9P5 680 aaKnown RBP16.77■□□□□ 0.28
NCKIPSD-206ENST00000439518 MEGF8Q7Z7M0 2845 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 A0A0U1RQV5 110 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 DCTDP32321 178 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 ROM1Q03395 351 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 KCTD18Q6PI47 426 aaPredicted RBP16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 SLC36A1Q7Z2H8 476 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 FAM216BQ8N7L0 139 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 SCCPDHQ8NBX0 429 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 GATAD2BQ8WXI9 593 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 RPL3LQ92901 407 aaKnown RBP16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 RNF170Q96K19 258 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 WDR13Q9H1Z4 485 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 FAM206AQ9NX38 181 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 HAO2Q9NYQ3 351 aa16.76■□□□□ 0.27
NCKIPSD-206ENST00000439518 IGHV1-69DA0A0B4J2H0 117 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 POM121CA8CG34 1229 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 PRR32B1ATL7 298 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 GPR37O15354 613 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 IGHV1-69P01742 117 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 PTGES3Q15185 160 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 CDONQ4KMG0 1287 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZDHHC23Q8IYP9 409 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 OR5T2Q8NGG2 359 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 PIGCQ92535 297 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 LHX4Q969G2 390 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 ITFG2Q969R8 447 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 TMIGD2Q96BF3 282 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 FAM71F1Q96KD3 344 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 DMRTB1Q96MA1 342 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 RAB3IPQ96QF0 476 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 DNTTIP1Q9H147 329 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 ACOXLQ9NUZ1 547 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 KPTNQ9Y664 436 aa16.75■□□□□ 0.27
NCKIPSD-206ENST00000439518 TMEM269A0A1B0GVZ9 245 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 FAM181BA6NEQ2 426 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 PSMD9O00233 223 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 PRKYO43930 277 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZNF254O75437 659 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 MELTFP08582 738 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 MRPL3P09001 348 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 MAP2K3P46734 347 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 ESRRGP62508 458 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 EFNB1P98172 346 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 BNIP1Q12981 228 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 LCN1P1Q5VSP4 162 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 TMEM86BQ8N661 226 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 OR5K1Q8NHB7 308 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 OR8B4Q96RC9 309 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 MROQ9BYG7 248 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 COPS3Q9UNS2 423 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 MMP24Q9Y5R2 645 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 TMEM14AQ9Y6G1 99 aa16.74■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZNF816-ZNF321PA0A0X1KG74 233 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 NDUFB3O43676 98 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 IGLV3-1P01715 115 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 SELLP14151 372 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms