RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RABGAP1LQ5R372 815 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C10orf120Q5SQS8 335 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C1orf220Q5T0J3 134 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C1orf134Q5TEV5 83 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM225Q6GV28 225 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 PPP1R2P3Q6NXS1 205 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 ERICH5Q6P6B1 374 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF562Q6V9R5 426 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 RNF165Q6ZSG1 346 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM26Q6ZUK4 368 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CENPUQ71F23 418 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 VTCN1Q7Z7D3 282 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SCD5Q86SK9 330 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC26A11Q86WA9 606 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TGIF2LXQ8IUE1 241 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD302Q8IX05 232 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C9orf40Q8IXQ3 194 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CCDC36Q8IYA8 594 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM71AQ8IYT1 594 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 KATNAL2Q8IYT4 538 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MCOLN2Q8IZK6 566 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SYCE1Q8N0S2 351 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC35F6Q8N357 371 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MREGQ8N565 214 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZSCAN4Q8NAM6 433 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM161BQ8NDZ6 487 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SPATA4Q8NEY3 305 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 BPIFCQ8NFQ6 507 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR5D13Q8NGL4 314 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR9A1PQ8NGU1 263 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MARCH1Q8TCQ1 289 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 ACTRT1Q8TDG2 376 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SPRYD4Q8WW59 207 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 KIFAP3Q92845 792 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MCHR2Q969V1 340 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 EFHD2Q96C19 240 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C8orf44Q96CB5 159 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SDSLQ96GA7 329 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM80Q96HE8 168 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SLC35E1Q96K37 410 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 NAPGQ99747 312 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 NABP2Q9BQ15 211 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHRDL1Q9BU40 450 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 PARD6BQ9BYG5 372 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 IL22Q9GZX6 179 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAGT1Q9H0U3 335 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR51J1Q9H342 316 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 C16orf95Q9H693 158 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 NARFLQ9H6Q4 476 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 DHX33Q9H6R0 707 aaKnown RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SMYD3Q9H7B4 428 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM185BQ9H7F4 350 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 KAT8Q9H7Z6 458 aaKnown RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MRPS30Q9NP92 439 aaKnown RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MYOZ1Q9NP98 299 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 AGPAT3Q9NRZ7 376 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CBLN4Q9NTU7 201 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SMOXQ9NWM0 555 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 STOX2Q9P2F5 926 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHRNA9Q9UGM1 479 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD300AQ9UGN4 299 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF223Q9UK11 482 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 SNX12Q9UMY4 172 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 STK38LQ9Y2H1 464 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 IFT52Q9Y366 437 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 WSB1Q9Y6I7 421 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 MYH11P35749 1972 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
HMGB1P18-201ENST00000438801 A0A087X0T9 212 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 SNTNA6NMZ2 147 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 MIF4GDA9UHW6 222 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 C9JVG2 144 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 F8VZ95 297 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 BTN3A3O00478 584 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 LSM1O15116 133 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 STX7O15400 261 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHMP2AO43633 222 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 STX11O75558 287 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CBR3O75828 277 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 SCGNO76038 276 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 EPPINO95925 133 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 APOA1P02647 267 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD5P06127 495 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD55P08174 381 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM228BP0C875 321 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 PNMA6AP0CW24 399 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF3P17036 446 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 MSR1P21757 451 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 PAICSP22234 425 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 YWHABP31946 246 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CDH5P33151 784 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 ATP5C1P36542 298 aaKnown RBP1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 ACTR1BP42025 376 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 GNPDA1P46926 289 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CASP4P49662 377 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 CCNG1P51959 295 aa1.51□□□□□ -2.17
HMGB1P18-201ENST00000438801 SEC61GP60059 68 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms