RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TMUB2Q71RG4 321 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 FAM219AQ8IW50 185 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 LTBP2Q14767 1821 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 AQP7P3A6NL99 342 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 H7C417 338 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 EGR4Q05215 589 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 GPR157Q5UAW9 335 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 NHLRC1Q6VVB1 395 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 BEND4Q6ZU67 534 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 SGPP2Q8IWX5 399 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR5M9Q8NGP3 310 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 FNDC9Q8TBE3 224 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 DNTTIP1Q9H147 329 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR6C6A6NF89 314 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 SELENOPP49908 381 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 RAB2AP61019 212 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 IKZF1Q13422 519 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 CD276Q5ZPR3 534 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 MAMSTRQ6ZN01 415 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR1J2Q8NGS2 313 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 NUDCD2Q8WVJ2 157 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 TMED6Q8WW62 240 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 PSMF1Q92530 271 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 SCMH1Q96GD3 660 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 REEP6Q96HR9 211 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 MESP1Q9BRJ9 268 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 GPR27Q9NS67 375 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 KCNIP1Q9NZI2 227 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 DUSP13Q9UII6 198 aa10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR5H15A6NDH6 313 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 LRP3O75074 770 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 NRASP01111 189 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 PPP3CBP16298 524 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF32P17041 273 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 TAS2R31P59538 309 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 TGIF1Q15583 401 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 SULF2Q8IWU5 870 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 GCNT2Q8N0V5 402 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 SLC26A10Q8NG04 563 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR4D6Q8NGJ1 314 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 WDR89Q96FK6 387 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 DNAJB11Q9UBS4 358 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR5V1Q9UGF6 321 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 MRPS18BQ9Y676 258 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 RPS10-NUDT3A0A1W2PQS6 291 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 MED6O75586 246 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 HPXP02790 462 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 PET100P0DJ07 73 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 MAGEA5P43359 124 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 RPS10P46783 165 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 TAS2R46P59540 309 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF528Q3MIS6 628 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 LRRTM1Q86UE6 522 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR1F12Q8NHA8 337 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 NIT2Q9NQR4 276 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR14J1Q9UGF5 321 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 FOXJ3Q9UPW0 622 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 A0A0J9YW62 118 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 COX6A1P12074 109 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 CD96P40200 585 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 TBC1D28Q2M2D7 210 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 H3F3CQ6NXT2 135 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR5AS1Q8N127 324 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 PXT1Q8NFP0 134 aa10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 COL25A1Q9BXS0 654 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-202ENST00000438773 SLC34A2O95436 690 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 PMP2P02689 132 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ACSM4P0C7M7 580 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 NANOS3P60323 173 aaKnown RBP10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 BTG1P62324 171 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 LINC00303Q3SY05 128 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF774Q6NX45 483 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF385AQ96PM9 386 aaKnown RBP10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 HRASLSQ9HDD0 168 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ST6GALNAC2Q9UJ37 374 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 MCRIP1C9JLW8 97 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 XRCC3O43542 346 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 MMP15P51511 669 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 TAF9Q16594 264 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 CLVS2Q5SYC1 327 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR51A4Q8NGJ6 313 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 OR14K1Q8NGZ2 314 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 SLC25A21Q9BQT8 299 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ZNF286AQ9HBT8 521 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 IGHV3-64DA0A0J9YX35 117 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 TIMM8AO60220 97 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 AQP8O94778 261 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 CD3DP04234 171 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 ARR3P36575 388 aa10.25□□□□□ -0.77
TRAPPC9-202ENST00000438773 RAB1AP62820 205 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms