RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 VMO1Q7Z5L0 202 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 LDLRAD3Q86YD5 345 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 ERI1Q8IV48 349 aaKnown RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 DEFB107AQ8IZN7 70 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 GCSAMQ8N6F7 178 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 AQP11Q8NBQ7 271 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SLC37A3Q8NCC5 494 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 PAPD5Q8NDF8 572 aaKnown RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 CSNK2A3Q8NEV1 391 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 FAM81AQ8TBF8 368 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 TEX47Q8TBZ9 253 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 C12orf43Q96C57 262 aaKnown RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 MISP3Q96FF7 219 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 REEP6Q96HR9 211 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 PGAM5Q96HS1 289 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 HIST1H2AAQ96QV6 131 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 INTS14Q96SY0 518 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 CCL13Q99616 98 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 CITED1Q99966 193 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SIRPDQ9H106 197 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 MYLK2Q9H1R3 596 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 RGCCQ9H4X1 137 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 CNTD2Q9H8S5 307 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 REEP1Q9H902 201 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 ABCB9Q9NP78 766 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SIRT7Q9NRC8 400 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 ZNF446Q9NWS9 450 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 PDP1Q9P0J1 537 aaPredicted RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 TAGLN3Q9UI15 199 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 SAMHD1Q9Y3Z3 626 aaKnown RBP6.41□□□□□ -1.38
VPS50-204ENST00000438395 LYVE1Q9Y5Y7 322 aa6.41□□□□□ -1.38
VPS50-204ENST00000438395 H3BN98 237 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 DCTN3O75935 186 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 H2BFMP0C1H6 154 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 ZNF121P58317 390 aaPredicted RBP6.4□□□□□ -1.38
VPS50-204ENST00000438395 CSNK2BP67870 215 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.38
VPS50-204ENST00000438395 TAF9Q16594 264 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 FAM98BQ52LJ0 330 aaKnown RBP6.4□□□□□ -1.38
VPS50-204ENST00000438395 WDR38Q5JTN6 314 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 TEX36Q5VZQ5 186 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 NCR3LG1Q68D85 454 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 CYP2R1Q6VVX0 501 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 SHFQ7M4L6 423 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 COMMD2Q86X83 199 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 TIGD4Q8IY51 512 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 FAM216BQ8N7L0 139 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 OR1M1Q8NGA1 313 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 OR5R1Q8NH85 324 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 NPRL2Q8WTW4 380 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 SPSB4Q96A44 273 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 MED30Q96HR3 178 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 BTBD10Q9BSF8 475 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 TEX12Q9BXU0 123 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 ARMC1Q9NVT9 282 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 IL20Q9NYY1 176 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 KAAG1Q9UBP8 84 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 VPREB3Q9UKI3 123 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 MPC1Q9Y5U8 109 aa6.4□□□□□ -1.38
VPS50-204ENST00000438395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
VPS50-204ENST00000438395 hCG_38984A0A1B0GV85 526 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PRD5 423 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PRF3 423 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PRM7 423 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 MEIOCA2RUB1 952 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 C5orf63A6NC05 138 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 TMEM210A6NLX4 147 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 CDIPTO14735 213 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 NPFFO15130 113 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 SNX3O60493 162 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 JUNBP17275 347 aaPredicted RBP6.39□□□□□ -1.39
VPS50-204ENST00000438395 NDUFB7P17568 137 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 GABRA5P31644 462 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 TGFBR2P37173 567 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 IER3P46695 156 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 CAPZA1P52907 286 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 RPS7P62081 194 aaKnown RBP6.39□□□□□ -1.39
VPS50-204ENST00000438395 FAM3AP98173 230 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 TEX30Q5JUR7 227 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 OR2T5Q6IEZ7 315 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 WDR82Q6UXN9 313 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 Q6ZTK2 550 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 GALNT4Q8N4A0 578 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 OR8D4Q8NGM9 314 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 OR4C13Q8NGP0 309 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 OR2T29Q8NH02 315 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 LINC01006Q8NI28 216 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 RNF133Q8WVZ7 376 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 LRGUKQ96M69 825 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 PKP2Q99959 881 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 RBM4BQ9BQ04 359 aaKnown RBP6.39□□□□□ -1.39
VPS50-204ENST00000438395 ABHD6Q9BV23 337 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 DNTTIP1Q9H147 329 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 MUC13Q9H3R2 512 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 MAGIXQ9H6Y5 334 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 METTL8Q9H825 291 aaKnown RBP6.39□□□□□ -1.39
VPS50-204ENST00000438395 ZNF556Q9HAH1 456 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 CMC2Q9NRP2 79 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms