RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ATP1B3P54709 279 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 MTCP1P56278 107 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 PER3P56645 1201 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 RAB25P57735 213 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 TAS2R19P59542 299 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 P2RY6Q15077 328 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 PCGF3Q3KNV8 242 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 PLEKHN1Q494U1 663 aaPredicted RBP13.33□□□□□ -0.28
SGCE-205ENST00000437425 ZNF585AQ6P3V2 769 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 UNQ6126/PRO20091Q6UXV3 157 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 MRPL21Q7Z2W9 205 aaKnown RBP13.33□□□□□ -0.28
SGCE-205ENST00000437425 GABRG1Q8N1C3 465 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 CNEP1R1Q8N9A8 125 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 TMEM229BQ8NBD8 167 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 TNFAIP8L1Q8WVP5 186 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.28
SGCE-205ENST00000437425 KCNK15Q9H427 330 aa13.33□□□□□ -0.28
SGCE-205ENST00000437425 ICMTO60725 284 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 PRAF2O60831 178 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 PDGFAP04085 211 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 PSMB1P20618 241 aaKnown RBP13.32□□□□□ -0.28
SGCE-205ENST00000437425 CCNOP22674 350 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 TUBG1P23258 451 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 HIKESHIQ53FT3 197 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 OR10K2Q6IF99 312 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 BEND4Q6ZU67 534 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 BIVMQ86UB2 503 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 SLC30A7Q8NEW0 376 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 SEH1LQ96EE3 360 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 MRPS24Q96EL2 167 aaKnown RBP13.32□□□□□ -0.28
SGCE-205ENST00000437425 ABHD17AQ96GS6 310 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 METTL9Q9H1A3 318 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 LPAR5Q9H1C0 372 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
SGCE-205ENST00000437425 ING4Q9UNL4 249 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 PROCRQ9UNN8 238 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 EPG5Q9HCE0 2579 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 ARHGAP21Q5T5U3 1957 aa13.32□□□□□ -0.28
SGCE-205ENST00000437425 CRTAPO75718 401 aaPredicted RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 CCNKO75909 580 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 MPIG6BO95866 241 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 CYB5AP00167 134 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 CST4P01036 141 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 H2AFB2P0C5Z0 115 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 TBPP20226 339 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 CPT2P23786 658 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 TIMP3P35625 211 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 RPS27AP62979 156 aaKnown RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 PPA1Q15181 289 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 GABRA6Q16445 453 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 TBR1Q16650 682 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 C1orf185Q5T7R7 199 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 Q6ZTK2 550 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 MDP1Q86V88 176 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 ZNF584Q8IVC4 421 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 C1orf174Q8IYL3 243 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 FAM89BQ8N5H3 189 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 DRAXINQ8NBI3 349 aaPredicted RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 CHST4Q8NCG5 386 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 GCDHQ92947 438 aaPredicted RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 TM2D1Q9BX74 207 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.28
SGCE-205ENST00000437425 GPR173Q9NS66 373 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 NUDT15Q9NV35 164 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
SGCE-205ENST00000437425 TPRP12270 2363 aaKnown RBP13.31□□□□□ -0.28
SGCE-205ENST00000437425 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 CA11O75493 328 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 IL2RAP01589 272 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 MT-ND4P03905 459 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 TPOP07202 933 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 GTF2F2P13984 249 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 CBX5P45973 191 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 VEGFCP49767 419 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 TNK1Q13470 666 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 GK2Q14410 553 aaPredicted RBP13.3□□□□□ -0.28
SGCE-205ENST00000437425 CDNFQ49AH0 187 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 MTFR2Q6P444 385 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 ZNF75AQ96N20 296 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 NKX3-1Q99801 234 aaPredicted RBP13.3□□□□□ -0.28
SGCE-205ENST00000437425 NOX3Q9HBY0 568 aa13.3□□□□□ -0.28
SGCE-205ENST00000437425 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
SGCE-205ENST00000437425 C7orf66A4D0T2 115 aa13.29□□□□□ -0.28
SGCE-205ENST00000437425 CSTBP04080 98 aaKnown RBP13.29□□□□□ -0.28
SGCE-205ENST00000437425 TMEM225BP0DP42 221 aa13.29□□□□□ -0.28
SGCE-205ENST00000437425 CBR1P16152 277 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms