RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 OPA3Q9H6K4 179 aa12□□□□□ -0.49
HDAC8-213ENST00000436675 KRCC1Q9NPI7 259 aaPredicted RBP12□□□□□ -0.49
HDAC8-213ENST00000436675 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
HDAC8-213ENST00000436675 RHBDD3Q9Y3P4 386 aa12□□□□□ -0.49
HDAC8-213ENST00000436675 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 TIPRLO75663 272 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 KRTAP10-11P60412 298 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 CD69Q07108 199 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 MAPRE2Q15555 327 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 KCTD8Q6ZWB6 473 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 TMEM185AQ8NFB2 350 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 OR5D13Q8NGL4 314 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 ANGPTL6Q8NI99 470 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 SGK3Q96BR1 496 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 WWC2-AS2Q96NR7 200 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 DDOQ99489 341 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 MICU1Q9BPX6 476 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 NDUFAF4Q9P032 175 aa11.99□□□□□ -0.49
HDAC8-213ENST00000436675 SIGLEC5O15389 551 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 ACAA1P09110 424 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-213ENST00000436675 RHCEP18577 417 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 CX3CR1P49238 355 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 GSK3AP49840 483 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 CAPZA1P52907 286 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 LGALS4P56470 323 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 CAV3P56539 151 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 ERVFRD-1P60508 538 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 MXRA7P84157 204 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 AANATQ16613 207 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 Q6ZS46 218 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 FAM57BQ71RH2 274 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 ZNF511Q8NB15 262 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 ZNRF1Q8ND25 227 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 OR4C15Q8NGM1 316 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 CDCA4Q9BXL8 241 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 DNTTIP1Q9H147 329 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 TLNRD1Q9H1K6 362 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 BRD7Q9NPI1 651 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 SAR1AQ9NR31 198 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 DNAJC27Q9NZQ0 273 aa11.98□□□□□ -0.49
HDAC8-213ENST00000436675 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 OR2AT4A6NND4 320 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 NME4O00746 187 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 PF4V1P10720 104 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 KRT72Q14CN4 511 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 KLHL12Q53G59 568 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 LIAT1Q6ZQX7 453 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 CPLX4Q7Z7G2 160 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 DYNAPQ8N1N2 210 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 LINC00471Q8N535 108 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 WFDC9Q8NEX5 89 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 SIKE1Q9BRV8 207 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 FUZQ9BT04 418 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 RTL8AQ9BWD3 113 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 PRSS22Q9GZN4 317 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 NLKQ9UBE8 527 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 COMMD3-BMI1R4GMX3 469 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 V9GYQ6 96 aa11.97□□□□□ -0.49
HDAC8-213ENST00000436675 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 ZNF850A8MQ14 1090 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 ZNF878C9JN71 531 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 ZNF593O00488 134 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-213ENST00000436675 GYPBP06028 91 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 FAHP16930 419 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-213ENST00000436675 ENTPD1P49961 510 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 PRDX4Q13162 271 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 CNN3Q15417 329 aaKnown RBP11.96□□□□□ -0.49
HDAC8-213ENST00000436675 Q8N2B8 174 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 FAM86B1Q8N7N1 296 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 OR10Z1Q8NGY1 313 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 WIPF2Q8TF74 440 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-213ENST00000436675 C7orf34Q96L11 122 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-213ENST00000436675 EGLN3Q9H6Z9 239 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 YY1AP1Q9H869 796 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 HEXA-AS1Q9H8Q6 139 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 ZNF319Q9P2F9 582 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 TCF19Q9Y242 345 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 AP3M1Q9Y2T2 418 aa11.96□□□□□ -0.49
HDAC8-213ENST00000436675 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 IDH3BO43837 385 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 RHBDL1O75783 438 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 PF4P02776 101 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 PSG2P11465 335 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 GLRA1P23415 457 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 HSD11B1P28845 292 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 IL5RAQ01344 420 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 SPIBQ01892 262 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 ZNF782Q6ZMW2 699 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-213ENST00000436675 CCDC121Q6ZUS5 278 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 PAPD5Q8NDF8 572 aaKnown RBP11.95□□□□□ -0.5
HDAC8-213ENST00000436675 OR2T4Q8NH00 348 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 PIGCQ92535 297 aa11.95□□□□□ -0.5
HDAC8-213ENST00000436675 RNF170Q96K19 258 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms