RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RPL18Q07020 188 aaKnown RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 PJVKQ0ZLH3 352 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 LSAMPQ13449 338 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 TCTN1Q2MV58 587 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 FNDC7Q5VTL7 733 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 FAM71E1Q6IPT2 247 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 UBE2FQ969M7 185 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 RNF2Q99496 336 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 GPR87Q9BY21 358 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 TOR2AQ5JU69 321 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 TMEM123Q8N131 208 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 BLNKQ8WV28 456 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 MARCH5Q9NX47 278 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 PPP1CBP62140 327 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 CA13Q8N1Q1 262 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 SPSB1Q96BD6 273 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ZDHHC11Q9H8X9 412 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 FITM1A5D6W6 292 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ATF1P18846 271 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF252P-AS1Q0IIN9 211 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 C16orf52Q8NHV5 167 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 PCNPQ8WW12 178 aaKnown RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 NGFP01138 241 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 CPN1P15169 458 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 HES3Q5TGS1 186 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 CCDC144NLQ6NUI1 221 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 ZNF441Q8N8Z8 693 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 DUS3LQ96G46 650 aaKnown RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 OR8B4Q96RC9 309 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 TEAD3Q99594 435 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 CXXC4Q9H2H0 198 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 PLA2G3Q9NZ20 509 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 TRBV23-1A0A0A0MS06 115 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 FZD6O60353 706 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 BHLHA15Q7RTS1 189 aaPredicted RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 SIRT3Q9NTG7 399 aaPredicted RBP10.09□□□□□ -0.79
SCN4A-201ENST00000435607 MOB4Q9Y3A3 225 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 R4GN57 208 aa10.09□□□□□ -0.79
SCN4A-201ENST00000435607 NEURL1O76050 574 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ANKRD36CQ5JPF3 1778 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 GSTZ1O43708 216 aaPredicted RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 GNG7O60262 68 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 CD276Q5ZPR3 534 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 SLC25A42Q86VD7 318 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 GALNT16Q8N428 558 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 SPICQ8N5J4 248 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 CA10Q9NS85 328 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 A4GNTQ9UNA3 340 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 RPL12P30050 165 aaKnown RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 CCKARP32238 428 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 COX20Q5RI15 118 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 VWA1Q6PCB0 445 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 LAX1Q8IWV1 398 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 TMEM116Q8NCL8 245 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF416Q9BWM5 594 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 NUP188Q5SRE5 1749 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 OR5AL1P0C617 328 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 HIST1H1CP16403 213 aaKnown RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 HNRNPA3P51991 378 aaKnown RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 SAXO2Q658L1 398 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 LYSMD2Q8IV50 215 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 CMBLQ96DG6 245 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ALKBH3Q96Q83 286 aaPredicted RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF426Q9BUY5 554 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 AQP8O94778 261 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 FUT3P21217 361 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 HCCSP53701 268 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 RELBQ01201 579 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 SLC17A1Q14916 467 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 RANGRFQ9HD47 186 aaPredicted RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ALPLP05186 524 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 HTR1DP28221 377 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 DLX1P56177 255 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF154Q13106 437 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 TMUB2Q71RG4 321 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 TMED6Q8WW62 240 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 PERPQ96FX8 193 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 KCNK15Q9H427 330 aa10.08□□□□□ -0.8
SCN4A-201ENST00000435607 ALG1L2C9J202 215 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 K7ESM1 405 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 PSMB6P28072 239 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 CEACAM6P40199 344 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 DAPP51397 102 aa10.07□□□□□ -0.8
SCN4A-201ENST00000435607 CMC2Q9NRP2 79 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms