RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 C14orf166Q9Y224 244 aaKnown RBP10.69□□□□□ -0.7
CLDN4-203ENST00000435050 NRASP01111 189 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 OR4E1P0C645 316 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 PRKACBP22694 351 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 APLNRP35414 380 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 PTGFRP43088 359 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 THAP6Q8TBB0 222 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CMSS1Q9BQ75 279 aaKnown RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ZNF471Q9BX82 626 aaPredicted RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 BCL2L14Q9BZR8 327 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 MFFQ9GZY8 342 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CA10Q9NS85 328 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 WDFY4Q6ZS81 3184 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 PRRC2CQ9Y520 2896 aaKnown RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CDX4O14627 284 aaPredicted RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CHRM2P08172 466 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 HOXB5P09067 269 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 EDN3P14138 238 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CPT2P23786 658 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ATP1B3P54709 279 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 RAP2BP61225 183 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ALKAL2Q6UX46 152 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 C6orf201Q7Z4U5 140 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 TMEM178AQ8NBL3 297 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 CPNE2Q96FN4 548 aaPredicted RBP10.68□□□□□ -0.7
CLDN4-203ENST00000435050 SCPEP1Q9HB40 452 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 DLL4Q9NR61 685 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 SLC7A10Q9NS82 523 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 IGLV3-32A0A0A0MS00 114 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 DUSP1P28562 367 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 RRADP55042 308 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ECH1Q13011 328 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 Q5BKY6 102 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ZNF766Q5HY98 468 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 ADPRHL1Q8NDY3 354 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 OR2AK2Q8NG84 335 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 DDA1Q9BW61 102 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 KLK13Q9UKR3 277 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 MAB21L2Q9Y586 359 aa10.68□□□□□ -0.7
CLDN4-203ENST00000435050 C21orf140B9A014 251 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RBP2P50120 134 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RNASE11Q8TAA1 199 aaKnown RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 PHB2Q99623 299 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 PPA2Q9H2U2 334 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 TMEM38BQ9NVV0 291 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 C7orf66A4D0T2 115 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 CDC14BO60729 498 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 ISG15P05161 165 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 ZNF17P17021 662 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 NOVA1P51513 510 aaKnown RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RAB35Q15286 201 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 SLC25A21Q9BQT8 299 aaPredicted RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 GPR35Q9HC97 309 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RDH8Q9NYR8 311 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 SPEF1Q9Y4P9 236 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 FRYLO94915 3013 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 NPIPB13A6NJU9 1138 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 NPIPB4C9JG80 1138 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RP2O75695 350 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 VSIG10L2P0DP72 767 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 FSTP19883 344 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 RAB1AP62820 205 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 ENDOGQ14249 297 aaKnown RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 OPCMLQ14982 345 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
CLDN4-203ENST00000435050 OR51F2Q8NH61 342 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 UQCC2Q9BRT2 126 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 OR2S2Q9NQN1 319 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 PRR13Q9NZ81 148 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 PTTG3PQ9NZH4 202 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 KCNN3Q9UGI6 736 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
CLDN4-203ENST00000435050 TRGV5A0A0B4J1U4 118 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 RAD51DO75771 328 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 FAM157BP0CG42 384 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 MRPS34P82930 218 aaKnown RBP10.66□□□□□ -0.7
CLDN4-203ENST00000435050 PSG4Q00888 419 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
CLDN4-203ENST00000435050 SLC25A26Q70HW3 274 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 SKA3Q8IX90 412 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 PRR18Q8N4B5 295 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 PROK2Q9HC23 129 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 SLC17A5Q9NRA2 495 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 COL4A2P08572 1712 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 OTOGLQ3ZCN5 2332 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 A0A1B0GTI1 187 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 NFYAP23511 347 aaPredicted RBP10.66□□□□□ -0.7
CLDN4-203ENST00000435050 RBMXP38159 391 aaKnown RBP10.66□□□□□ -0.7
CLDN4-203ENST00000435050 DRAM2Q6UX65 266 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 RTN4RL2Q86UN3 420 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
CLDN4-203ENST00000435050 SF3B5Q9BWJ5 86 aaKnown RBP10.66□□□□□ -0.7
CLDN4-203ENST00000435050 SH3BGRL2Q9UJC5 107 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms