RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SNCBQ16143 134 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 MICBQ29980 383 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 DEFB112Q30KQ8 113 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 BTN2A1Q7KYR7 527 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 GALNT4Q8N4A0 578 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 FAM216BQ8N7L0 139 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 HPSE2Q8WWQ2 592 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
PSPC1-202ENST00000427943 RPL3LQ92901 407 aaKnown RBP15.24■□□□□ 0.03
PSPC1-202ENST00000427943 TBX15Q96SF7 602 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 TLNRD1Q9H1K6 362 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 FAM206AQ9NX38 181 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 KAAG1Q9UBP8 84 aa15.24■□□□□ 0.03
PSPC1-202ENST00000427943 SRRM5B3KS81 715 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 CST4P01036 141 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 RNASE1P07998 156 aaKnown RBP15.23■□□□□ 0.03
PSPC1-202ENST00000427943 MUC1P15941 1255 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-202ENST00000427943 ATP6AP1Q15904 470 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 KCTD18Q6PI47 426 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-202ENST00000427943 COMMD2Q86X83 199 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 PNLDC1Q8NA58 520 aaKnown RBP15.23■□□□□ 0.03
PSPC1-202ENST00000427943 OR5T2Q8NGG2 359 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 FAM81AQ8TBF8 368 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 OR5P3Q8WZ94 311 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 RNF170Q96K19 258 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 WDFY2Q96P53 400 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 PRRG3Q9BZD7 231 aa15.23■□□□□ 0.03
PSPC1-202ENST00000427943 TMEM269A0A1B0GVZ9 245 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 P2RY10O00398 339 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 HOXA3O43365 443 aaPredicted RBP15.22■□□□□ 0.03
PSPC1-202ENST00000427943 TFF1P04155 84 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 LIPFP07098 398 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 EPHA2P29317 976 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 ESRRGP62508 458 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 FOXL1Q12952 345 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 DMRTC1Q5HYR2 192 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 METTL11BQ5VVY1 283 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 AMIGO2Q86SJ2 522 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 ZDHHC23Q8IYP9 409 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 TCEANCQ8N8B7 351 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 SCCPDHQ8NBX0 429 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 OR8B4Q96RC9 309 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 CNN2Q99439 309 aaKnown RBP15.22■□□□□ 0.03
PSPC1-202ENST00000427943 MROQ9BYG7 248 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 SIRPDQ9H106 197 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 WDR13Q9H1Z4 485 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 ABCB9Q9NP78 766 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 TNFRSF19Q9NS68 423 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 SNTG1Q9NSN8 517 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 DNAJB11Q9UBS4 358 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 ZNF391Q9UJN7 358 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 IKZF2Q9UKS7 526 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 PCDHGB1Q9Y5G3 927 aa15.22■□□□□ 0.03
PSPC1-202ENST00000427943 TMEM210A6NLX4 147 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 G3V2T6 193 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 AKR7A2O43488 359 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 SELLP14151 372 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 GPM6AP51674 278 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 ARF6P62330 175 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 MFGE8Q08431 387 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-202ENST00000427943 IKZF1Q13422 519 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 CEP78Q5JTW2 689 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 SLX4IPQ5VYV7 408 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 STUMQ69YW2 141 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 DEGS2Q6QHC5 323 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 SLC36A1Q7Z2H8 476 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 LHX4Q969G2 390 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 ZDHHC16Q969W1 377 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 FAM71F1Q96KD3 344 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-202ENST00000427943 PBOV1Q9GZY1 135 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 RPUSD1Q9UJJ7 312 aaKnown RBP15.21■□□□□ 0.03
PSPC1-202ENST00000427943 GTF2A1LQ9UNN4 478 aa15.21■□□□□ 0.03
PSPC1-202ENST00000427943 A0A0U1RQV5 110 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 CENPVL3A0A0U1RRI6 287 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ZNF816-ZNF321PA0A0X1KG74 233 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ZAR1LA6NP61 321 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 CLDN34H7C241 214 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 MAGEB4O15481 346 aaPredicted RBP15.2■□□□□ 0.02
PSPC1-202ENST00000427943 AMY2BP19961 511 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 FASP25445 335 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 MAP2K3P46734 347 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 RASSF2P50749 326 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 RIDAP52758 137 aaKnown RBP15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ROM1Q03395 351 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ZNF829Q3KNS6 432 aaPredicted RBP15.2■□□□□ 0.02
PSPC1-202ENST00000427943 C12orf73Q69YU5 71 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 MEPCEQ7L2J0 689 aaKnown RBP15.2■□□□□ 0.02
PSPC1-202ENST00000427943 SLC35F2Q8IXU6 374 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ZNF679Q8IYX0 411 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 OR10Z1Q8NGY1 313 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 OR51E1Q8TCB6 317 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 ASB17Q8WXJ9 295 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 LRTOMTQ8WZ04 291 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 PPP1R14AQ96A00 147 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 HIST1H2AAQ96QV6 131 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 IL4I1Q96RQ9 567 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 GABARAPL1Q9H0R8 117 aa15.2■□□□□ 0.02
PSPC1-202ENST00000427943 GPR84Q9NQS5 396 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms