RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CADP27708 2225 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MGAM2Q2M2H8 2515 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 TRGV8A0A0C4DH27 118 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CBY3A6NI87 242 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 OR6C65A6NJZ3 312 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RIIAD1A6NNX1 92 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 SLC1A7O00341 560 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MRPS14O60783 128 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 NDUFS7O75251 213 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 UPK3AO75631 287 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GLCEO94923 617 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 OR6A2O95222 327 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 IFNGP01579 166 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 IGHG1P01857 330 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 SMIM18P0DKX4 95 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 DBTP11182 482 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF3P17036 446 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 PCMT1P22061 227 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CHATP28329 748 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RPL4P36578 427 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CASP6P55212 293 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CLDN17P56750 224 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CSNK2BP67870 215 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MRPS34P82930 218 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 IL1RL1Q01638 556 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 FMODQ06828 376 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 LGALS3BPQ08380 585 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RAB40BQ12829 278 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MELKQ14680 651 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 EFNB3Q15768 340 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 FBXL19-AS1Q494R0 122 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 ESCO2Q56NI9 601 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RBM48Q5RL73 367 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 TSPO2Q5TGU0 170 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 OR2A2Q6IF42 318 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 LEG1Q6P5S2 330 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CASP12Q6UXS9 341 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GFRALQ6UXV0 394 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GPAT4Q86UL3 456 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GID4Q8IVV7 300 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CIARTQ8N365 385 aaPredicted RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 OR6K3Q8NGY3 331 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 OR2T4Q8NH00 348 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RPS4Y2Q8TD47 263 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GGHQ92820 318 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 SNAPC3Q92966 411 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MCHR2Q969V1 340 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 LGALS12Q96DT0 336 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CNBD2Q96M20 576 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 Q96MT0 163 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF75AQ96N20 296 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CDCA4Q9BXL8 241 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 PRRG3Q9BZD7 231 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 NDEL1Q9GZM8 345 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 Q9H521 79 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MED20Q9H944 212 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 RASSF1Q9NS23 344 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 SLC7A10Q9NS82 523 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 EMC3Q9P0I2 261 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 ZNF629Q9UEG4 869 aaPredicted RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 WARS2Q9UGM6 360 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 CYB5R1Q9UHQ9 305 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 TINAGQ9UJW2 476 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 MEMO1Q9Y316 297 aa4.66□□□□□ -1.66
C9orf3-205ENST00000427193 LSM2Q9Y333 95 aaKnown RBP4.66□□□□□ -1.66
C9orf3-205ENST00000427193 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.66
C9orf3-205ENST00000427193 CHD3Q12873 2000 aaKnown RBP4.65□□□□□ -1.66
C9orf3-205ENST00000427193 PHF3Q92576 2039 aaKnown RBP4.65□□□□□ -1.66
C9orf3-205ENST00000427193 HRNRQ86YZ3 2850 aaPredicted RBP4.65□□□□□ -1.66
C9orf3-205ENST00000427193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.65□□□□□ -1.66
C9orf3-205ENST00000427193 RNF212BA8MTL3 300 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 A8MXE2 369 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 PRR32B1ATL7 298 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 H7C1C5 153 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 XKRYO14609 159 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 ARHGEF9O43307 516 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 MRPL33O75394 65 aaKnown RBP4.65□□□□□ -1.67
C9orf3-205ENST00000427193 SYNGR4O95473 234 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 AMBPP02760 352 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 TK1P04183 234 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 GYPBP06028 91 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 TPOP07202 933 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 LYNP07948 512 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 MMP7P09237 267 aaPredicted RBP4.65□□□□□ -1.67
C9orf3-205ENST00000427193 QDPRP09417 244 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 SBK2P0C263 348 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 LIMS3P0CW19 117 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 LIMS4P0CW20 117 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 ALOX5APP20292 161 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 GTF2E2P29084 291 aaKnown RBP4.65□□□□□ -1.67
C9orf3-205ENST00000427193 CRABP1P29762 137 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 FMO3P31513 532 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 OTX1P32242 354 aaPredicted RBP4.65□□□□□ -1.67
C9orf3-205ENST00000427193 PEX19P40855 299 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 BLVRAP53004 296 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 GABARAPL2P60520 117 aa4.65□□□□□ -1.67
C9orf3-205ENST00000427193 LSM6P62312 80 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms