RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 GPER1Q99527 375 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 C7orf50Q9BRJ6 194 aaKnown RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 OBP2BQ9NPH6 170 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 KLK11Q9UBX7 282 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 ZNF835Q9Y2P0 537 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 CACNG2Q9Y698 323 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 TRAV18A0A075B6X5 111 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 NRASP01111 189 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 PTHLHP12272 177 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 BTCP35070 178 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 TBC1D28Q2M2D7 210 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 WDR31Q8NA23 367 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 DEDD2Q8WXF8 326 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
ACTB-204ENST00000425660 GPR173Q9NS66 373 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
ACTB-204ENST00000425660 MEIOCA2RUB1 952 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 H7C417 338 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 PRRG2O14669 202 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 ECDO95905 644 aaPredicted RBP13.12□□□□□ -0.31
ACTB-204ENST00000425660 CBR1P16152 277 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 PRSS12P56730 875 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 ZP1P60852 638 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 MOGAT2Q3SYC2 334 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
ACTB-204ENST00000425660 CXorf67Q86X51 503 aaPredicted RBP13.12□□□□□ -0.31
ACTB-204ENST00000425660 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 PIGTQ969N2 578 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
ACTB-204ENST00000425660 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
ACTB-204ENST00000425660 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 SULT1C2O00338 296 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CDC14BO60729 498 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 GLI4P10075 376 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 HOXC12P31275 282 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 RBP2P50120 134 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 AP3S2P59780 193 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 SSBP1Q04837 148 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 TSC22D1Q15714 1073 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 MRPL21Q7Z2W9 205 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 DOLPP1Q86YN1 238 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 OR56B2PQ8NGI1 322 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 OR5L1Q8NGL2 311 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 FAM46BQ96A09 425 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 PPP1R14BQ96C90 147 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 LPAR5Q9H1C0 372 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 TLN1Q9Y490 2541 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CENPXA8MT69 81 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CST4P01036 141 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CHRM2P08172 466 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CELA3BP08861 270 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 PRSS3P35030 304 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 FUT6P51993 359 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 MTCP1P56278 107 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 MRPL49Q13405 166 aaKnown RBP13.11□□□□□ -0.31
ACTB-204ENST00000425660 PLET1Q6UQ28 207 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 C1QL2Q7Z5L3 287 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 FTMTQ8N4E7 242 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 FAM169BQ8N8A8 192 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CSNK2A3Q8NEV1 391 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 TNFAIP8L1Q8WVP5 186 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 AQP3Q92482 292 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 WBP1Q96G27 269 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 CST11Q9H112 138 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 MMP28Q9H239 520 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 SCPEP1Q9HB40 452 aa13.11□□□□□ -0.31
ACTB-204ENST00000425660 INTS1Q8N201 2190 aaKnown RBP13.1□□□□□ -0.31
ACTB-204ENST00000425660 A0A1W2PR80 420 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 WIPF3A6NGB9 483 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 OR5H1A6NKK0 313 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 IGLV1-44P01699 117 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 MELTFP08582 738 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
ACTB-204ENST00000425660 IDH3GP51553 393 aaPredicted RBP13.1□□□□□ -0.31
ACTB-204ENST00000425660 SNTB2Q13425 540 aaKnown RBP13.1□□□□□ -0.31
ACTB-204ENST00000425660 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
ACTB-204ENST00000425660 ZNF474Q6S9Z5 364 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms