RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FBXO24O75426 580 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ALDOBP05062 364 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GSSP48637 474 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GSK3AP49840 483 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 GFOD2Q3B7J2 385 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NSUN5P1Q3KNT7 163 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAM57BQ71RH2 274 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAM185AQ8N0U4 392 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 KLHDC1Q8N7A1 406 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR6K6Q8NGW6 343 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PIGCQ92535 297 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SGK3Q96BR1 496 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 R3HDM4Q96D70 268 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NSMCE2Q96MF7 247 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CDCA4Q9BXL8 241 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SEMA6AQ9H2E6 1030 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NLKQ9UBE8 527 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CDH10Q9Y6N8 788 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PKD1L1Q8TDX9 2849 aa10.04□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR2AT4A6NND4 320 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RIIAD1A6NNX1 92 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SIGLEC5O15389 551 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ACAA1P09110 424 aaPredicted RBP10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF3P17036 446 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RPS27P42677 84 aaKnown RBP10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 EFNB2P52799 333 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 CBX1P83916 185 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF788Q6ZQV5 615 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 C11orf53Q8IXP5 236 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 C11orf44Q8N8P7 122 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TMEM185AQ8NFB2 350 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR2T33Q8NG76 320 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR51L1Q8NGJ5 315 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OR6N2Q8NGY6 317 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAM81AQ8TBF8 368 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 OTULINQ96BN8 352 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TSSK6Q9BXA6 273 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PRSS22Q9GZN4 317 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 C1orf21Q9H246 121 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SNTG1Q9NSN8 517 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 TBC1D23Q9NUY8 699 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RASL12Q9NYN1 266 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 RHBDD3Q9Y3P4 386 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 COMMD3-BMI1R4GMX3 469 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 V9GYQ6 96 aa10.03□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ZNF850A8MQ14 1090 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TNFRSF11BO00300 401 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SLC1A7O00341 560 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GSC2O15499 205 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AKR7A2O43488 359 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CD33P20138 364 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MAP2K3P46734 347 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SLC25A1P53007 311 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CSNK2BP67870 215 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 HOXA4Q00056 320 aaPredicted RBP10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRDX4Q13162 271 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 KLRD1Q13241 179 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 HSP90B2PQ58FF3 399 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 STUMQ69YW2 141 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RASSF6Q6ZTQ3 369 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 THAP5Q7Z6K1 395 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZDHHC23Q8IYP9 409 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 Q8N7P7 452 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF511Q8NB15 262 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SLC37A3Q8NCC5 494 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CAPSLQ8WWF8 208 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CFHR4Q92496 578 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RPL3LQ92901 407 aaKnown RBP10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 INTS14Q96SY0 518 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TEX12Q9BXU0 123 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 NIPAL2Q9H841 368 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 IL20Q9NYY1 176 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DNAJC27Q9NZQ0 273 aa10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.02□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DHRS12A0PJE2 317 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CCNB2O95067 398 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CLIC3O95833 236 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CST4P01036 141 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF121P58317 390 aaPredicted RBP10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 VAX1Q5SQQ9 334 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 Q6ZPA2 131 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ERI1Q8IV48 349 aaKnown RBP10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 THEM6Q8WUY1 208 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR5P3Q8WZ94 311 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TNFRSF14Q92956 283 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 FUZQ9BT04 418 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TLNRD1Q9H1K6 362 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 EGLN3Q9H6Z9 239 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 NDE1Q9NXR1 346 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GMPR2Q9P2T1 348 aaKnown RBP10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ABCD2Q9UBJ2 740 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms