RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 Q3ZCU0 254 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A53Q5H9E4 307 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 LYG2Q86SG7 212 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 MRGPRFQ96AM1 343 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 WBP1Q96G27 269 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 OXGR1Q96P68 337 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 REG4Q9BYZ8 158 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 KCNMB2Q9Y691 235 aa9.4□□□□□ -0.91
CUX1-205ENST00000425244 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 C5orf63A6NC05 138 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 SOCS1O15524 211 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 SSX5O60225 188 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 ATP1B3P54709 279 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 CHAF1BQ13112 559 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A47Q6Q0C1 308 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A42Q86VD7 318 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 RPS19BP1Q86WX3 136 aaKnown RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 PDZD9Q8IXQ8 264 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 OR5AS1Q8N127 324 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 OR6X1Q8NH79 312 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 RNF138Q8WVD3 245 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 PPP1R1CQ8WVI7 109 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 RAB3CQ96E17 227 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 ZNF107Q9UII5 783 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 A0A0A6YYD4 124 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 C9orf170A2RU37 121 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 F5H5K5 113 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 TP53I11O14683 189 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 KCNAB3O43448 404 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 WDPCPO95876 746 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 ZBTB25P24278 435 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 MPGP29372 298 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 CASRP41180 1078 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 GUCA1AP43080 201 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 NHLH1Q02575 133 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 ZNF468Q5VIY5 522 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 RAET1LQ5VY80 246 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 NAA40Q86UY6 237 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 LRRC18Q8N456 261 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 OR6K3Q8NGY3 331 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 MARCH1Q8TCQ1 289 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 PGAM5Q96HS1 289 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 GNRHR2Q96P88 292 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 C12orf57Q99622 126 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 VRK1Q99986 396 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 ZNF416Q9BWM5 594 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 MOB1AQ9H8S9 216 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 PRELID3BQ9Y3B1 194 aa9.39□□□□□ -0.91
CUX1-205ENST00000425244 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
CUX1-205ENST00000425244 IGLV3-32A0A0A0MS00 114 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 KANTRA0A1W2PQU2 76 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 TMEM14DPA8MWL7 114 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 TLX3O43711 291 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 CD63P08962 238 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 SPINK2P20155 84 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 AGTR1P30556 359 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 LUMP51884 338 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 FGL1Q08830 312 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 ARMC10Q8N2F6 343 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 THOC3Q96J01 351 aaKnown RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 PHB2Q99623 299 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ZNF471Q9BX82 626 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 DLL3Q9NYJ7 618 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 PTPRBP23467 1997 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 AQP7P3A6NL99 342 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 E9PLN8 166 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 TM4SF5O14894 197 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 CDC14BO60729 498 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 PI3P19957 117 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ZP3P21754 424 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ITGA3P26006 1051 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 EIF1P41567 113 aaKnown RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 CSNK1A1P48729 337 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 NPY4RP50391 375 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 SLC35A1P78382 337 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ARFRP1Q13795 201 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 PLAC9Q5JTB6 97 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 C11orf87Q6NUJ2 197 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ADPRHL1Q8NDY3 354 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 OR5M9Q8NGP3 310 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 OR1S1Q8NH92 325 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 M1APQ8TC57 530 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 SLC25A43Q8WUT9 341 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 ZNF75AQ96N20 296 aa9.38□□□□□ -0.91
CUX1-205ENST00000425244 MS4A7Q9GZW8 240 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 ELL3Q9HB65 397 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 MYOZ1Q9NP98 299 aaPredicted RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 PNRC2Q9NPJ4 139 aaKnown RBP9.38□□□□□ -0.91
CUX1-205ENST00000425244 SLC2A8Q9NY64 477 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms