RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR3A4PP47883 348 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 LSM6P62312 80 aaKnown RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SWI5Q1ZZU3 235 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 C14orf28Q4W4Y0 310 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 GPR157Q5UAW9 335 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 UEVLDQ8IX04 471 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SULT4A1Q9BR01 284 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 SDHAF3Q9NRP4 125 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 FAM212BQ9NTI7 297 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-204ENST00000424143 MED29Q9NX70 200 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 B3GALT1Q9Y5Z6 326 aa13.42□□□□□ -0.26
C9orf3-204ENST00000424143 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 A0A1W2PR77 199 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 LMO7DNF2Z398 122 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 K7EPK0 472 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 KCNAB3O43448 404 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 IFNA21P01568 189 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 LMO1P25800 156 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 PTGFRP43088 359 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF133P52736 654 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 ZNF121P58317 390 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CLRN1P58418 232 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CSNK2A1P68400 391 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 FAM109BQ6ICB4 259 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 FAM71E2Q8N5Q1 922 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 LRTM2Q8N967 370 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 NFAM1Q8NET5 270 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CSNK2A3Q8NEV1 391 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 OR1L3Q8NH93 324 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 PP6455Q8WZ26 134 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 ROBO4Q8WZ75 1007 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 PRRX2Q99811 253 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CMSS1Q9BQ75 279 aaKnown RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 PECRQ9BY49 303 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 PCED1AQ9H1Q7 454 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CLEC1BQ9P126 229 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 METTL1Q9UBP6 276 aaKnown RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 STRAPQ9Y3F4 350 aaKnown RBP13.41□□□□□ -0.26
C9orf3-204ENST00000424143 V9GYS6 101 aa13.41□□□□□ -0.26
C9orf3-204ENST00000424143 CRYM-AS1A6NIL9 109 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 CRTAPO75718 401 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-204ENST00000424143 HCKP08631 526 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 GLRA1P23415 457 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 KCNJ3P48549 501 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 ABHD12BQ7Z5M8 362 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-204ENST00000424143 PLXDC1Q8IUK5 500 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 OR9K2Q8NGE7 335 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 LMX1AQ8TE12 382 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 OXGR1Q96P68 337 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 TMEM106CQ9BVX2 250 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 EHFQ9NZC4 300 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
C9orf3-204ENST00000424143 CD207Q9UJ71 328 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 CYP8B1Q9UNU6 501 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 AMDHD2Q9Y303 409 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 FAM96BQ9Y3D0 163 aa13.4□□□□□ -0.26
C9orf3-204ENST00000424143 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.26
C9orf3-204ENST00000424143 KIAA0100Q14667 2235 aaKnown RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 RP1P56715 2156 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 E5RGE8 158 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 TRAF3IP2O43734 574 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 ACAA1P09110 424 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 CPT2P23786 658 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 NFYBP25208 207 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 CD27P26842 260 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 FCGR2CP31995 323 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 PTGER4P35408 488 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 RAB1AP62820 205 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 HGFACQ04756 655 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 CHRFAM7AQ494W8 412 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 FOXL2NBQ6ZUU3 175 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 OR51T1Q8NGJ9 327 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 OR51F2Q8NH61 342 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 HIST1H2BAQ96A08 127 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 GALNT14Q96FL9 552 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF251Q9BRH9 671 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 GINS3Q9BRX5 216 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 TMEM231Q9H6L2 316 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 CERS4Q9HA82 394 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 OR2S2Q9NQN1 319 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 NSG2Q9Y328 171 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 PHF3Q92576 2039 aaKnown RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 DHRS7CA6NNS2 312 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 FARS2O95363 451 aaKnown RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 F12P00748 615 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 GLAP06280 429 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 S100A9P06702 114 aaKnown RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 DANCRP0C864 163 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 DHPSP49366 369 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 ARL4DP49703 201 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms