RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 RFC3P40938 356 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 IAH1Q2TAA2 248 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 ACTBL2Q562R1 376 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 FAM76BQ5HYJ3 339 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 DHRS7BQ6IAN0 325 aaPredicted RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 PGAM5Q96HS1 289 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 SEC11CQ9BY50 192 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 CARHSP1Q9Y2V2 147 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 RAMP1O60894 148 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 CSTBP04080 98 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 SFTA3P0C7M3 94 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 KLK2P20151 261 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 OR2A2Q6IF42 318 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 APCDD1LQ8NCL9 501 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF726A6NNF4 738 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 PET100P0DJ07 73 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF43P17038 809 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 CD27P26842 260 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 RBMXP38159 391 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 P2RY4P51582 365 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 AVPI1Q5T686 147 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 IL34Q6ZMJ4 242 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 SMRP1Q8NCR6 262 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 NOXO1Q8NFA2 376 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 LSM5Q9Y4Y9 91 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 IGKV1-9A0A0C4DH69 117 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 SHISA7A6NL88 538 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF814B7Z6K7 855 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 RNASEK-C17orf49H0YIS7 233 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 MFNGO00587 321 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF205O95201 554 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF17P17021 662 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 GABRR1P24046 479 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 PEA15Q15121 130 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 KISS1Q15726 138 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 AADACL3Q5VUY0 350 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF529Q6P280 563 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ETV3LQ6ZN32 361 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 PIGTQ969N2 578 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 MRPL13Q9BYD1 178 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 SLC5A7Q9GZV3 580 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 WIF1Q9Y5W5 379 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 H2AFB1P0C5Y9 115 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 EIF5AL1Q6IS14 154 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 PEG10Q86TG7 708 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 NAXEQ8NCW5 288 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 ADAMTS17Q8TE56 1095 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 AQP10Q96PS8 301 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 SULT4A1Q9BR01 284 aa13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 RCC2Q9P258 522 aaKnown RBP13.37□□□□□ -0.27
SEMA3B-203ENST00000419007 PGA4P0DJD7 388 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 PGA3P0DJD8 388 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 GLI4P10075 376 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 CAV2P51636 162 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 CHAF1BQ13112 559 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 OR10G3Q8NGC4 313 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 FBLN5Q9UBX5 448 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 MEMO1Q9Y316 297 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 VPS13AQ96RL7 3174 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 A0A1W2PR77 199 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 C10orf142B7Z368 130 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 E9PLN8 166 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 FCGR2AP12318 317 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 FAHP16930 419 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 GUCA1AP43080 201 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 SWI5Q1ZZU3 235 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 ZNF528Q3MIS6 628 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 TMEM176BQ3YBM2 270 aaPredicted RBP13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 OCSTAMPQ9BR26 566 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
SEMA3B-203ENST00000419007 K7EPK0 472 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 FOSL2P15408 326 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 PTGFRP43088 359 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 PPT1P50897 306 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 TAS2R46P59540 309 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 ACY1Q03154 408 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 C6orf201Q7Z4U5 140 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 LRRC18Q8N456 261 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 AKR1E2Q96JD6 320 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 HDHD3Q9BSH5 251 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 CRB3Q9BUF7 120 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 KLHL13Q9P2N7 655 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 HPNP05981 417 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 Q6ZRG5 221 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 DOK3Q7L591 496 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 POC1AQ8NBT0 407 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 SPOCK3Q9BQ16 436 aa13.35□□□□□ -0.27
SEMA3B-203ENST00000419007 CHRNA10Q9GZZ6 450 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms