RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PCED1AQ9H1Q7 454 aa10.09□□□□□ -0.79
PTCH1-205ENST00000418258 DEFB108AA8MXU0 73 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 GPR31O00270 319 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 FBP1P09467 338 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 AMTP48728 403 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 XKR7Q5GH72 579 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 RPUSD3Q6P087 351 aaKnown RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 Q8IYB0 196 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 NUDCD2Q8WVJ2 157 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 NHSL1Q5SYE7 1610 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 HSPB2A8KAH6 182 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 M0R1X1 148 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 COX5AP20674 150 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 HSPB2Q16082 182 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 TOR2AQ5JU69 321 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 C14orf79Q96F83 325 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 CDX2Q99626 313 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 ISG20L2Q9H9L3 353 aaKnown RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 SEBOXQ9HB31 216 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF425Q6IV72 752 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 SFTPA2Q8IWL1 248 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 SFTPA1Q8IWL2 248 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 TM4SF19Q96DZ7 209 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 OR2A25A4D2G3 310 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 CD3EP07766 207 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 AGERQ15109 404 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 SIGLECL1Q8N7X8 197 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 BCL2L2Q92843 193 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF727A8MUV8 499 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 F5H697 171 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MS4A18H0YCH9 400 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 TAAR5O14804 337 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 SOX8P57073 446 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 Q1RN00 199 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MS4A18Q3C1V0 323 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MFSD4AQ8N468 514 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 OR4S1Q8NGB4 309 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 FBXO34Q9NWN3 711 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 UGT2A1Q9Y4X1 527 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MEX3AA1L020 520 aaKnown RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MBTPS2O43462 519 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 ETHE1O95571 254 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 PDGFBP01127 241 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 LIPAP38571 399 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 C4orf17Q53FE4 359 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 OR6S1Q8NH40 331 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 LHX4Q969G2 390 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 MYEOVQ96EZ4 313 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
PTCH1-205ENST00000418258 PAPPAQ13219 1627 aa10.08□□□□□ -0.8
PTCH1-205ENST00000418258 KRASP01116 189 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ATF1P18846 271 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR3A4PP47883 348 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ERVFC1-1P60608 527 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 PDZD11Q5EBL8 140 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF787Q6DD87 383 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 KIRREL2Q6UWL6 708 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 TMEM102Q8N9M5 508 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 SLC35B4Q969S0 331 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 A0A0A6YYD5 115 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 TMPRSS2O15393 492 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 HRASP01112 189 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ENDOGQ14249 297 aaKnown RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 AVPI1Q5T686 147 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 DGAT2L6Q6ZPD8 337 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 RND1Q92730 232 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 SIGLEC11Q96RL6 698 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 G3V3Q6 166 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ANKRD37Q7Z713 158 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 KTI12Q96EK9 354 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ADGRL4Q9HBW9 690 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 AKR1C3P42330 323 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ASCL1P50553 236 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 PPP1CAP62136 330 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 PPP1CBP62140 327 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 FAAP20Q6NZ36 180 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 UBE3DQ7Z6J8 389 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 CDH26Q8IXH8 852 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR10D3Q8NH80 312 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR1L3Q8NH93 324 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 MTCH2Q9Y6C9 303 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 PLXNA1Q9UIW2 1896 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ZNF239Q16600 458 aaKnown RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR2T2Q6IF00 324 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 ADGRG7Q96K78 797 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 OR2M5A3KFT3 312 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
PTCH1-205ENST00000418258 DUS4LO95620 317 aaKnown RBP10.07□□□□□ -0.8
PTCH1-205ENST00000418258 IL9P15248 144 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms