RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CDCA4Q9BXL8 241 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 PKIBQ9C010 78 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 DPAGT1Q9H3H5 408 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CHRAC1Q9NRG0 131 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SNTG1Q9NSN8 517 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SERTAD4Q9NUC0 356 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 CNOT2Q9NZN8 540 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 GNG8Q9UK08 70 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 MRTO4Q9UKD2 239 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC7A11Q9UPY5 501 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 ANKRD12Q6UB98 2062 aa4.77□□□□□ -1.65
ECHDC1-206ENST00000417628 TRBV11-1A0A0K0K1C0 115 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CXorf65A6NEN9 183 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF716A6NP11 495 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 J3KR12 359 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 FXYD1O00168 92 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 NR5A2O00482 541 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SCAMP2O15127 329 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC16A5O15375 505 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 TMPRSS11DO60235 418 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PRAMEF11O60813 436 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PROSCO94903 275 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 KDM4BO94953 1096 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR4F21O95013 312 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 GCGP01275 180 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 LIPFP07098 398 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF735P0CB33 412 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 C8orf89P0DMQ9 161 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC2A2P11168 524 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF37AP17032 561 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 GGT1P19440 569 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 TBPP20226 339 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 FBLP22087 321 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 USF1P22415 310 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC2A5P22732 501 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 DPP4P27487 766 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR3A1P47881 315 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PPT1P50897 306 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 LUMP51884 338 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 FGF8P55075 233 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ATP5IP56385 69 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 RAE1P78406 368 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CRYZQ08257 329 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 RAB35Q15286 201 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SURF2Q15527 256 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 EXT1Q16394 746 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CYP51A1Q16850 503 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ACSF3Q4G176 576 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 MESTQ5EB52 335 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 IDNKQ5T6J7 187 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR4F3Q6IEY1 312 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 TMEM205Q6UW68 189 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 DPY19L2P2Q6ZN68 376 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 RNF165Q6ZSG1 346 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 TMUB2Q71RG4 321 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SSX7Q7RTT5 188 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SSX6Q7RTT6 188 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF679Q8IYX0 411 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 MTURNQ8N3F0 131 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 FAM89BQ8N5H3 189 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR52L2PQ8NGH6 319 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR56B1Q8NGI3 324 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR2T35Q8NGX2 323 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 OR56B4Q8NH76 319 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 GLMPQ8WWB7 406 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 HPSE2Q8WWQ2 592 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SMPDL3AQ92484 453 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CNOT9Q92600 299 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CDS1Q92903 461 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ARL11Q969Q4 196 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC25A46Q96AG3 418 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PYCR2Q96C36 320 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF503Q96F45 646 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ELMOD3Q96FG2 381 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CERS2Q96G23 380 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZNF382Q96SR6 550 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 RNF2Q99496 336 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SULT4A1Q9BR01 284 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 THAP7Q9BT49 309 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 C1QTNF6Q9BXI9 259 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SYT4Q9H2B2 425 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 CDCP1Q9H5V8 836 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 LPAR2Q9HBW0 351 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 GSKIPQ9P0R6 139 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 NLKQ9UBE8 527 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PSORS1C1Q9UIG5 152 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 ZDHHC2Q9UIJ5 367 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 HSF4Q9ULV5 492 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 SLC22A13Q9Y226 551 aa4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 EXOGQ9Y2C4 368 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-206ENST00000417628 PRSS21Q9Y6M0 314 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms