RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 OR56B1Q8NGI3 324 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 PIGTQ969N2 578 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
HDAC9-208ENST00000417496 UCN2Q96RP3 112 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
HDAC9-208ENST00000417496 NMES1Q9C002 83 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 EHFQ9NZC4 300 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 FLVCR1Q9Y5Y0 555 aa12.73□□□□□ -0.37
HDAC9-208ENST00000417496 NAT1P18440 290 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 MSX1P28360 303 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 HIST3H3Q16695 136 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF585AQ6P3V2 769 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 DOK3Q7L591 496 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 CLRN3Q8NCR9 226 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 SPACA9Q96E40 222 aaPredicted RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF837Q96EG3 531 aaPredicted RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 OCSTAMPQ9BR26 566 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 MOB1AQ9H8S9 216 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF160Q9HCG1 818 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF701Q9NV72 531 aaPredicted RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF581Q9P0T4 197 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 RARRES3Q9UL19 164 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 F8VVB4 439 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 F8VWA3 439 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 HPNP05981 417 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 SFTPBP07988 381 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 FCGR2AP12318 317 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 TPT1P13693 172 aaKnown RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 TAS2R31P59538 309 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 S100A10P60903 97 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ACY1Q03154 408 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 RSPO1Q2MKA7 263 aaPredicted RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 CBLN2Q8IUK8 224 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 CHRDQ9H2X0 955 aa12.72□□□□□ -0.37
HDAC9-208ENST00000417496 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
HDAC9-208ENST00000417496 TRBV6-7A0A0A0MS04 114 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 AQP7P3A6NL99 342 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 NAXEQ8NCW5 288 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 DNASE2BQ8WZ79 361 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.37
HDAC9-208ENST00000417496 NUDT16L1Q9BRJ7 211 aaKnown RBP12.71□□□□□ -0.37
HDAC9-208ENST00000417496 URM1Q9BTM9 101 aaKnown RBP12.71□□□□□ -0.37
HDAC9-208ENST00000417496 RBM24Q9BX46 236 aaKnown RBP12.71□□□□□ -0.37
HDAC9-208ENST00000417496 TLNRD1Q9H1K6 362 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 PCDHB16Q9NRJ7 776 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 OCIAD1Q9NX40 245 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 PISDQ9UG56 409 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 FAM96BQ9Y3D0 163 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 FGF16O43320 207 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 FAM157CP0CG43 387 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 GABRR1P24046 479 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 LDLRAD3Q86YD5 345 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 SLC30A7Q8NEW0 376 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 OR4A4PQ8NGN8 299 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 CDC6Q99741 560 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 SLC6A15Q9H2J7 730 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 HRH4Q9H3N8 390 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 ANAPC10Q9UM13 185 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 B3GALT1Q9Y5Z6 326 aa12.71□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 CCL1P22362 96 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 ZNF385CQ66K41 422 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 STOML3Q8TAV4 291 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 CPNE2Q96FN4 548 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PECRQ9BY49 303 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 MCTS1Q9ULC4 181 aaKnown RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 IGLV3-32A0A0A0MS00 114 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PMS2P1A4D2B8 440 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 RPS2P15880 293 aaKnown RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PNLIPP16233 465 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 RCC1P18754 421 aaPredicted RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 FPR2P25090 351 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PEG10Q86TG7 708 aaKnown RBP12.7□□□□□ -0.38
HDAC9-208ENST00000417496 LHFPL1Q86WI0 220 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 CCDC36Q8IYA8 594 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 SLC22A8Q8TCC7 542 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 CCDC74BQ96LY2 380 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 OSGIN2Q9Y236 505 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 ADAMTS20P59510 1910 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 ADAMTS9Q9P2N4 1935 aa12.7□□□□□ -0.38
HDAC9-208ENST00000417496 DHRS7CA6NNS2 312 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 F8W036 122 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 ANGPTL7O43827 346 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CD79AP11912 226 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 RRADP55042 308 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 BLOC1S1P78537 153 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 ECH1Q13011 328 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 ENDOGQ14249 297 aaKnown RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PABPC1L2AQ5JQF8 200 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms