RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RBM4BQ9BQ04 359 aaKnown RBP11.87□□□□□ -0.51
PAF1-202ENST00000416728 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 SEMA6AQ9H2E6 1030 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 MED20Q9H944 212 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 HAO2Q9NYQ3 351 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 ZNF319Q9P2F9 582 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 MPC1Q9Y5U8 109 aa11.87□□□□□ -0.51
PAF1-202ENST00000416728 NKX6-3A6NJ46 265 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 GLCEO94923 617 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 AMY2BP19961 511 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 TGM4P49221 684 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 PRDX4Q13162 271 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 DHRS7BQ6IAN0 325 aaPredicted RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 ASPHD2Q6ICH7 369 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 Q6ZSV7 163 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 OR10G2Q8NGC3 310 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
PAF1-202ENST00000416728 AMELYQ99218 206 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 DNTTIP1Q9H147 329 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 MUC13Q9H3R2 512 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 TCF7L1Q9HCS4 588 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
PAF1-202ENST00000416728 TMEM210A6NLX4 147 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 RNASEK-C17orf49H0YIS7 233 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 H3BN98 237 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 NPFFO15130 113 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 PAHP00439 452 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 SELLP14151 372 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
PAF1-202ENST00000416728 PRB3Q04118 309 aaPredicted RBP11.85□□□□□ -0.51
PAF1-202ENST00000416728 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 CD300LDQ6UXZ3 194 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 DHFR2Q86XF0 187 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 ARHGAP24Q8N264 748 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 IQCF1Q8N6M8 205 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 OR10Z1Q8NGY1 313 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 C8orf46Q8TAG6 207 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 RPL3LQ92901 407 aaKnown RBP11.85□□□□□ -0.51
PAF1-202ENST00000416728 PKP2Q99959 881 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 NIPSNAP1Q9BPW8 284 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 WDR13Q9H1Z4 485 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 SNTG1Q9NSN8 517 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
PAF1-202ENST00000416728 A0A1W2PRD5 423 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 A0A1W2PRF3 423 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 A0A1W2PRM7 423 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 ZNF850A8MQ14 1090 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 LYNP07948 512 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 ACKR3P25106 362 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 DLX1P56177 255 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 KLRD1Q13241 179 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 Q8N7P7 452 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 OTOSQ8NHW6 89 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 THEM6Q8WUY1 208 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 PIGCQ92535 297 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 MED30Q96HR3 178 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 RNF170Q96K19 258 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 RAB3IPQ96QF0 476 aaPredicted RBP11.84□□□□□ -0.51
PAF1-202ENST00000416728 FEVQ99581 238 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 C16orf95Q9H693 158 aa11.84□□□□□ -0.51
PAF1-202ENST00000416728 SLC25A10Q9UBX3 287 aaPredicted RBP11.84□□□□□ -0.51
PAF1-202ENST00000416728 MEIOCA2RUB1 952 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 SLC22A31A6NKX4 558 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 B2RBV5 119 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 AKR7A2O43488 359 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 CST4P01036 141 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 SAA4P35542 130 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 TGFBR2P37173 567 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 GNGT1P63211 74 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 TRIM25Q14258 630 aaKnown RBP11.83□□□□□ -0.52
PAF1-202ENST00000416728 GK3PQ14409 553 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 DGUOKQ16854 277 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 PLBD1Q6P4A8 553 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 ZNF788Q6ZQV5 615 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 PIGWQ7Z7B1 504 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 OR5R1Q8NH85 324 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 ANGPTL6Q8NI99 470 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 GIPC3Q8TF64 312 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 GAFA1Q96PS6 74 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 METTL8Q9H825 291 aaKnown RBP11.83□□□□□ -0.52
PAF1-202ENST00000416728 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
PAF1-202ENST00000416728 A0A1W2PQ09 198 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 PRR23D1E9PI22 279 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms