RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 WDFY2Q96P53 400 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 PKP2Q99959 881 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 ZNF556Q9HAH1 456 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 FAM206AQ9NX38 181 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 TVP23BQ9NYZ1 205 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
UBXN4-203ENST00000416538 WNK1Q9H4A3 2382 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 GSC2O15499 205 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 TOX4O94842 621 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 IGLV3-1P01715 115 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 APOC1P02654 83 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 CFL1P23528 166 aaKnown RBP12.46□□□□□ -0.41
UBXN4-203ENST00000416538 MTNR1AP48039 350 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 CRISP1P54107 249 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 OR5T2Q8NGG2 359 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 SP140LQ9H930 580 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 TRIM36Q9NQ86 728 aa12.46□□□□□ -0.41
UBXN4-203ENST00000416538 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.41
UBXN4-203ENST00000416538 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
UBXN4-203ENST00000416538 P2RY10O00398 339 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MAGEB4O15481 346 aaPredicted RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 NDUFA2O43678 99 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 SRSF10O75494 262 aaKnown RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 RHBDL1O75783 438 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 CST4P01036 141 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MELTFP08582 738 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 HOXB6P17509 224 aaKnown RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 OMGP23515 440 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 GNALP38405 381 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 ARF6P62330 175 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 RELBQ01201 579 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 FOXL1Q12952 345 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 BNIP1Q12981 228 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 PTGES3Q15185 160 aaKnown RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 SNAPC1Q16533 368 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 TEAD3Q99594 435 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MICU1Q9BPX6 476 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 RTL8AQ9BWD3 113 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
UBXN4-203ENST00000416538 TNFRSF19Q9NS68 423 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 SNTG1Q9NSN8 517 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 LAMP5Q9UJQ1 280 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 MPC1Q9Y5U8 109 aa12.45□□□□□ -0.42
UBXN4-203ENST00000416538 ANXA2P2A6NMY6 339 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 AKR7A2O43488 359 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 MUC1P15941 1255 aaPredicted RBP12.44□□□□□ -0.42
UBXN4-203ENST00000416538 EFNB1P98172 346 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 IL5RAQ01344 420 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 MICBQ29980 383 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 FAM76BQ5HYJ3 339 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 CD276Q5ZPR3 534 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 Q6YL49 198 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 PLEKHG7Q6ZR37 379 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 KRT74Q7RTS7 529 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 PDZD9Q8IXQ8 264 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 PNLDC1Q8NA58 520 aaKnown RBP12.44□□□□□ -0.42
UBXN4-203ENST00000416538 LY6G5BQ8NDX9 201 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 OR5K1Q8NHB7 308 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 PIGCQ92535 297 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 LHX4Q969G2 390 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 NRBF2Q96F24 287 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
UBXN4-203ENST00000416538 OR8B4Q96RC9 309 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 CHIAQ9BZP6 476 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 SEMA6AQ9H2E6 1030 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 NIPAL2Q9H841 368 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 YY1AP1Q9H869 796 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 KIF17Q9P2E2 1029 aa12.44□□□□□ -0.42
UBXN4-203ENST00000416538 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 A0A0U1RQV5 110 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 TMEM210A6NLX4 147 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ZAR1LA6NP61 321 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 SPRY1O43609 319 aaPredicted RBP12.43□□□□□ -0.42
UBXN4-203ENST00000416538 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 TTRP02766 147 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 TGM4P49221 684 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 GPM6AP51674 278 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ROM1Q03395 351 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 IKZF1Q13422 519 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ATP6AP1Q15904 470 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 DGUOKQ16854 277 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 CEP78Q5JTW2 689 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 METTL11BQ5VVY1 283 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 SLX4IPQ5VYV7 408 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 C16orf87Q6PH81 154 aa12.43□□□□□ -0.42
UBXN4-203ENST00000416538 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms