RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TRAV20A0A0B4J274 112 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 hCG_1807616A0A1W2PRN6 198 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 TMEM210A6NLX4 147 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 IGHA1P01876 353 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 HNF1AP20823 631 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 CPT2P23786 658 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 RBMXP38159 391 aaKnown RBP15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 CAPGP40121 348 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 GALEQ14376 348 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF771Q7L3S4 317 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 OR1M1Q8NGA1 313 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 OR5P3Q8WZ94 311 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 TMEM186Q96B77 213 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 PPP1R3EQ9H7J1 279 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 PATZ1Q9HBE1 687 aaKnown RBP15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 LPAR2Q9HBW0 351 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 SLC22A13Q9Y226 551 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 PIGLQ9Y2B2 252 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 V9GYS6 101 aa15.12■□□□□ 0.01
SEMA3B-201ENST00000416295 A0A1B0GTI1 187 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 A0A1B0GVI7 797 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 IRGMA1A4Y4 181 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 P2RY10O00398 339 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 UBCP0CG48 685 aaKnown RBP15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 FAHP16930 419 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 CCL1P22362 96 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 OR12D2P58182 307 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF154Q13106 437 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 KCNJ8Q15842 424 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 CHRFAM7AQ494W8 412 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF404Q494X3 552 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 WDR38Q5JTN6 314 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 Q6ZSR3 168 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 WDR86Q86TI4 376 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 C8orf59Q8N0T1 100 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 SYS1Q8N2H4 156 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 CCDC54Q8NEL0 328 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 OR52I1Q8NGK6 324 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 CNIH3Q8TBE1 160 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 RNF170Q96K19 258 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 ALG8Q9BVK2 526 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 SHARPINQ9H0F6 387 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 TMEM165Q9HC07 324 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 TRIM36Q9NQ86 728 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 MYRFQ9Y2G1 1151 aa15.11■□□□□ 0.01
SEMA3B-201ENST00000416295 OR5B21A6NL26 309 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 CEACAM18A8MTB9 384 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 J3QLW9 94 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 SYT7O43581 403 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 PLPP2O43688 288 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 FOXH1O75593 365 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF205O95201 554 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF19P17023 458 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 PSMB10P40306 273 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 SMN1Q16637 294 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 CEACAM21Q3KPI0 293 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 FDX2Q6P4F2 183 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 KCTD8Q6ZWB6 473 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 LHFPL3Q86UP9 236 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 PRSS35Q8N3Z0 413 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 OR14K1Q8NGZ2 314 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 OR2G2Q8NGZ5 317 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 HPSE2Q8WWQ2 592 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 C4orf36Q96KX1 117 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 JAM3Q9BX67 310 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 BEX2Q9BXY8 128 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 TLNRD1Q9H1K6 362 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 HIF1ANQ9NWT6 349 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 ERVK13-1Q9NX77 482 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 MIOXQ9UGB7 285 aa15.1■□□□□ 0.01
SEMA3B-201ENST00000416295 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.09■□□□□ 0.011e-14■■□□□ 13.5
SEMA3B-201ENST00000416295 KIAA1324LA8MWY0 1029 aaPredicted RBP15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 F5H0A9 414 aaPredicted RBP15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 H0YJX3 145 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 LGALS8O00214 317 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 NRASP01111 189 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 HTR1AP08908 422 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 RPS2P15880 293 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF12P17014 697 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 THBS2P35442 1172 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 GNG3P63215 75 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 CSNK2BP67870 215 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 MRPL28Q13084 256 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 ODF4Q2M2E3 257 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 ESCO2Q56NI9 601 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 FAM201AQ5SY85 155 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 CLVS2Q5SYC1 327 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 FAM120AOSQ5T036 256 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 PLCXD3Q63HM9 321 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 DCDC5Q6ZRR9 648 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 ZNF826PQ6ZT77 177 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 NLRC3Q7RTR2 1065 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 BOLLQ8N9W6 283 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 OR5A2Q8NGI9 324 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 PELI1Q96FA3 418 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 TMEM246Q9BRR3 403 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 VCX3BQ9H321 246 aa15.09■□□□□ 0.01
SEMA3B-201ENST00000416295 FGF20Q9NP95 211 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms