RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GAGE5Q13069 117 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 GAGE6Q13070 117 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 GGTLC2Q14390 218 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 PRPSAP1Q14558 356 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 TRMT5Q32P41 509 aaKnown RBP2.05□□□□□ -2.08
MCF2-204ENST00000414978 ZFP69Q49AA0 526 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 CARD16Q5EG05 197 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 MEDAGQ5VYS4 303 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 TRIM40Q6P9F5 258 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 NPWQ8N729 165 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 INO80EQ8NBZ0 244 aaPredicted RBP2.05□□□□□ -2.08
MCF2-204ENST00000414978 TTLQ8NG68 377 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 DYDC1Q8WWB3 177 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 DCUN1D4Q92564 292 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 NEIL2Q969S2 332 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 MARC2Q969Z3 335 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 C8orf44Q96CB5 159 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 TLCD1Q96CP7 247 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 BTN2A3PQ96KV6 586 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 POM121L2Q96KW2 1035 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ZNF300Q96RE9 604 aaPredicted RBP2.05□□□□□ -2.08
MCF2-204ENST00000414978 SORT1Q99523 831 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 VAT1Q99536 393 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 RBBP8Q99708 897 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 KCNS3Q9BQ31 491 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 LINC00597Q9H2U6 94 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 MOB1AQ9H8S9 216 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ANKHQ9HCJ1 492 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 KCNIP1Q9NZI2 227 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ERVW-1Q9UQF0 538 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ANK2Q01484 3957 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 SPTBN2O15020 2390 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 USP9XQ93008 2570 aaPredicted RBP2.05□□□□□ -2.08
MCF2-204ENST00000414978 IGHV3-38A0A0C4DH36 116 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 E7ESA3 106 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 PRAMEF26H0Y7S4 382 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 K7EN84 100 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 FGF16O43320 207 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 IGHV3-9P01782 118 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ZNF250P15622 560 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 MAGEA6P43360 314 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 NPBWR2P48146 333 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 HMGA2P52926 109 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ATP12AP54707 1039 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 VLDLRP98155 873 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 OR5I1Q13606 314 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ZNF235Q14590 738 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 IMPG1Q17R60 797 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 TPGS1Q6ZTW0 290 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 NFE4Q86UQ8 179 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 CYP4Z1Q86W10 505 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 ZNF567Q8N184 647 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 OR5T2Q8NGG2 359 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 OR9A4Q8NGU2 314 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 OR51E1Q8TCB6 317 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 CXorf40AQ8TE69 158 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 BAALCQ8WXS3 180 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 PPP1R2P1Q96PQ5 205 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 FEM1AQ9BSK4 669 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 SHCBP1LQ9BZQ2 653 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 FOLH1BQ9HBA9 442 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 SLCO1B3Q9NPD5 702 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 LYARQ9NX58 379 aaKnown RBP2.05□□□□□ -2.08
MCF2-204ENST00000414978 NKIRAS1Q9NYS0 192 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 DHRS4-AS1Q9P1J3 65 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 LGALS13Q9UHV8 139 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 PLLPQ9Y342 182 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 COX11Q9Y6N1 276 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 OTOGQ6ZRI0 2925 aa2.05□□□□□ -2.08
MCF2-204ENST00000414978 RAI1Q7Z5J4 1906 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 TMEM120BA0PK00 339 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 MEIOCA2RUB1 952 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TVP23AA6NH52 213 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ERI2A8K979 691 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 F5H5T6 163 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NDUFAB1O14561 156 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 SHOX2O60902 331 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 MLNP12872 115 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NANOS2P60321 138 aaKnown RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 IL9RQ01113 521 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 AQP6Q13520 282 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 EIF4EBP2Q13542 120 aaPredicted RBP2.04□□□□□ -2.08
MCF2-204ENST00000414978 ZNF146Q15072 292 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 FAM182AQ5T1J6 154 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 ADAMTSL4-AS1Q5T5F5 129 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 PVRIGQ6DKI7 326 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 LCN12Q6JVE5 192 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 C1orf94Q6P1W5 598 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 SPSB3Q6PJ21 355 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 IGFL3Q6UXB1 125 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 LIX1Q8N485 282 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 GPR26Q8NDV2 337 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR10A7Q8NGE5 316 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TCTEX1D2Q8WW35 142 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 OR8B4Q96RC9 309 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 RANBP9Q96S59 729 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NIPSNAP3BQ9BS92 247 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 NICN1Q9BSH3 213 aa2.04□□□□□ -2.08
MCF2-204ENST00000414978 TM6SF2Q9BZW4 377 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms